Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : AKI    

Bonds between two atoms of the molecule

Total Number of Bonds: 72


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C doub 1.32 N Y
2 N1 C6 N C sing 1.33 N Y
3 C2 N3 C N sing 1.32 N Y
4 N3 C4 N C doub 1.33 N Y
5 C4 C5 C C sing 1.4 N Y
6 C4 NBN C N sing 1.38 N N
7 C5 C6 C C doub 1.4 N Y
8 C5 CAG C C sing 1.47 N Y
9 C6 OAI C O sing 1.34 N Y
10 CAA CAB C C doub 1.38 N Y
11 CAA CAF C C sing 1.38 N Y
12 CAB CAC C C sing 1.39 N Y
13 CAC CAD C C doub 1.4 N Y
14 CAC CAG C C sing 1.48 N Y
15 CAD CAE C C sing 1.38 N Y
16 CAE CAF C C doub 1.38 N Y
17 CAG CAH C C doub 1.37 N Y
18 CAH OAI C O sing 1.35 N Y
19 CAH CAL C C sing 1.47 N Y
20 CAL CAM C C doub 1.4 N Y
21 CAL CAQ C C sing 1.4 N Y
22 CAM CAN C C sing 1.38 N Y
23 CAN CAO C C doub 1.38 N Y
24 CAO CAP C C sing 1.38 N Y
25 CAP CAQ C C doub 1.38 N Y
26 CAV CAW C C sing 1.53 N N
27 CAV NBN C N sing 1.47 N N
28 CAW CAX C C sing 1.51 N N
29 CAX CAY C C doub 1.38 N Y
30 CAX CBC C C sing 1.38 N Y
31 CAY CAZ C C sing 1.38 N Y
32 CAZ CBA C C doub 1.39 N Y
33 CBA CBB C C sing 1.39 N Y
34 CBA NBD C N sing 1.4 N N
35 CBB CBC C C doub 1.38 N Y
36 NBD CBE N C sing 1.35 N N
37 CBE NBF C N sing 1.35 N N
38 CBE OBM C O doub 1.22 N N
39 NBF CBG N C sing 1.4 N N
40 CBG CBH C C doub 1.39 N Y
41 CBG CBL C C sing 1.39 N Y
42 CBH CBI C C sing 1.38 N Y
43 CBI CBJ C C doub 1.38 N Y
44 CBJ CBK C C sing 1.38 N Y
45 CBK CBL C C doub 1.38 N Y
46 C2 H2 C H sing 1.08 N N
47 CAA HAA C H sing 1.08 N N
48 CAB HAB C H sing 1.08 N N
49 CAD HAD C H sing 1.08 N N
50 CAE HAE C H sing 1.08 N N
51 CAF HAF C H sing 1.08 N N
52 CAM HAM C H sing 1.08 N N
53 CAN HAN C H sing 1.08 N N
54 CAO HAO C H sing 1.08 N N
55 CAP HAP C H sing 1.08 N N
56 CAQ HAQ C H sing 1.08 N N
57 CAV HAV C H sing 1.09 N N
58 CAV HAVA C H sing 1.09 N N
59 CAW HAW C H sing 1.09 N N
60 CAW HAWA C H sing 1.09 N N
61 CAY HAY C H sing 1.08 N N
62 CAZ HAZ C H sing 1.08 N N
63 CBB HBB C H sing 1.08 N N
64 CBC HBC C H sing 1.08 N N
65 NBD HNBD N H sing 0.97 N N
66 NBF HNBF N H sing 0.97 N N
67 CBH HBH C H sing 1.08 N N
68 CBI HBI C H sing 1.08 N N
69 CBJ HBJ C H sing 1.08 N N
70 CBK HBK C H sing 1.08 N N
71 CBL HBL C H sing 1.08 N N
72 NBN HNBN N H sing 0.97 N N