Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9YC    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 NAQ CAP N C trip 1.14 N N
2 CAP CAM C C sing 1.47 N N
3 OAV PAT O P doub 1.48 N N
4 CAM CAK C C sing 1.51 N N
5 OAW PAT O P sing 1.61 N N
6 OAO CAL O C doub 1.21 N N
7 PAT OAU P O sing 1.61 N N
8 PAT OAS P O sing 1.61 N N
9 CAK CAL C C sing 1.48 N N
10 CAK NAJ C N doub 1.28 N N
11 CAL OAN C O sing 1.35 N N
12 CAR OAS C O sing 1.43 N N
13 CAR CAA C C sing 1.51 N N
14 NAJ CAI N C sing 1.47 N N
15 CAI CAF C C sing 1.51 N N
16 CAA CAF C C doub 1.39 N Y
17 CAA CAB C C sing 1.38 N Y
18 CAF CAE C C sing 1.39 N Y
19 CAB NAC C N doub 1.32 N Y
20 CAE OAH C O sing 1.36 N N
21 CAE CAD C C doub 1.39 N Y
22 NAC CAD N C sing 1.32 N Y
23 CAD CAG C C sing 1.51 N N
24 OAU H1 O H sing 0.97 N N
25 OAW H2 O H sing 0.97 N N
26 CAR H3 C H sing 1.09 N N
27 CAR H4 C H sing 1.09 N N
28 CAB H5 C H sing 1.08 N N
29 CAG H6 C H sing 1.09 N N
30 CAG H7 C H sing 1.09 N N
31 CAG H8 C H sing 1.09 N N
32 OAH H9 O H sing 0.97 N N
33 CAI H10 C H sing 1.09 N N
34 CAI H11 C H sing 1.09 N N
35 OAN H12 O H sing 0.97 N N
36 CAM H13 C H sing 1.09 N N
37 CAM H14 C H sing 1.09 N N