Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
93J
Bonds between two atoms of the molecule
Total Number of Bonds: 58
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C05
N02
C
N
sing
1.47
N
N
2
CL1
C21
CL
C
sing
1.74
N
N
3
F01
C22
F
C
sing
1.35
N
N
4
C22
C21
C
C
doub
1.39
N
Y
5
C22
C23
C
C
sing
1.38
N
Y
6
C21
C20
C
C
sing
1.38
N
Y
7
N02
C06
N
C
sing
1.47
N
N
8
N02
C04
N
C
sing
1.47
N
N
9
C23
C24
C
C
doub
1.38
N
Y
10
C20
C19
C
C
doub
1.39
N
Y
11
C24
C19
C
C
sing
1.39
N
Y
12
C19
N05
C
N
sing
1.4
N
N
13
C03
C04
C
C
sing
1.51
N
N
14
C03
C02
C
C
doub
1.33
E
N
15
O01
C01
O
C
doub
1.22
N
N
16
C01
C02
C
C
sing
1.47
N
N
17
C01
N01
C
N
sing
1.35
N
N
18
N05
C09
N
C
sing
1.38
N
N
19
N01
C12
N
C
sing
1.4
N
N
20
C11
C12
C
C
doub
1.38
N
Y
21
C11
C10
C
C
sing
1.4
N
Y
22
C12
C13
C
C
sing
1.4
N
Y
23
C09
C10
C
C
doub
1.41
N
Y
24
C09
C08
C
C
sing
1.4
N
Y
25
C10
C15
C
C
sing
1.42
N
Y
26
N04
C18
N
C
trip
1.14
N
N
27
C18
C08
C
C
sing
1.43
N
N
28
C08
C07
C
C
doub
1.4
N
Y
29
C13
O02
C
O
sing
1.36
N
N
30
C13
C14
C
C
doub
1.38
N
Y
31
O02
C16
O
C
sing
1.43
N
N
32
C15
C14
C
C
sing
1.4
N
Y
33
C15
N03
C
N
doub
1.34
N
Y
34
C07
N03
C
N
sing
1.31
N
Y
35
C16
C17
C
C
sing
1.53
N
N
36
C17
H1
C
H
sing
1.09
N
N
37
C17
H2
C
H
sing
1.09
N
N
38
C17
H3
C
H
sing
1.09
N
N
39
C20
H4
C
H
sing
1.08
N
N
40
C24
H5
C
H
sing
1.08
N
N
41
C02
H6
C
H
sing
1.08
N
N
42
C03
H7
C
H
sing
1.08
N
N
43
C04
H8
C
H
sing
1.09
N
N
44
C04
H9
C
H
sing
1.09
N
N
45
N01
H10
N
H
sing
0.97
N
N
46
C05
H12
C
H
sing
1.09
N
N
47
C05
H13
C
H
sing
1.09
N
N
48
C05
H14
C
H
sing
1.09
N
N
49
C06
H15
C
H
sing
1.09
N
N
50
C06
H16
C
H
sing
1.09
N
N
51
C06
H17
C
H
sing
1.09
N
N
52
C07
H18
C
H
sing
1.08
N
N
53
C11
H19
C
H
sing
1.08
N
N
54
C14
H20
C
H
sing
1.08
N
N
55
C16
H21
C
H
sing
1.09
N
N
56
C16
H22
C
H
sing
1.09
N
N
57
N05
H23
N
H
sing
0.97
N
N
58
C23
H24
C
H
sing
1.08
N
N