Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 80T    

Bonds between two atoms of the molecule

Total Number of Bonds: 241


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C88 C89 C C sing 1.53 N N
2 C88 C87 C C sing 1.53 N N
3 C89 C90 C C sing 1.53 N N
4 C87 C86 C C sing 1.53 N N
5 C86 C85 C C sing 1.53 N N
6 C85 C84 C C sing 1.53 N N
7 C84 C83 C C sing 1.53 N N
8 C39 C38 C C sing 1.53 N N
9 C37 C38 C C sing 1.53 N N
10 C37 C36 C C sing 1.53 N N
11 C35 C34 C C sing 1.53 N N
12 C35 C36 C C sing 1.53 N N
13 C83 C82 C C sing 1.51 N N
14 C33 C34 C C sing 1.53 N N
15 C33 C32 C C sing 1.53 N N
16 C80 C81 C C sing 1.51 N N
17 C80 C79 C C sing 1.53 N N
18 C82 C81 C C doub 1.31 Z N
19 C32 C31 C C sing 1.53 N N
20 C79 C78 C C sing 1.53 N N
21 C31 C30 C C sing 1.53 N N
22 C78 C77 C C sing 1.53 N N
23 C29 C30 C C sing 1.53 N N
24 C29 C28 C C sing 1.53 N N
25 C76 C77 C C sing 1.53 N N
26 C76 C75 C C sing 1.53 N N
27 C60 C61 C C sing 1.53 N N
28 C60 C59 C C sing 1.53 N N
29 C62 C61 C C sing 1.53 N N
30 C58 C57 C C sing 1.53 N N
31 C58 C59 C C sing 1.53 N N
32 C57 C56 C C sing 1.53 N N
33 C28 C27 C C sing 1.53 N N
34 C75 C74 C C sing 1.53 N N
35 C16 C15 C C sing 1.53 N N
36 C16 C17 C C sing 1.53 N N
37 C56 C55 C C sing 1.51 N N
38 C11 C10 C C doub 1.31 Z N
39 C11 C12 C C sing 1.51 N N
40 C13 C14 C C sing 1.53 N N
41 C13 C12 C C sing 1.53 N N
42 C10 C09 C C sing 1.51 N N
43 C14 C15 C C sing 1.53 N N
44 C17 C18 C C sing 1.53 N N
45 C18 C19 C C sing 1.53 N N
46 C27 C26 C C sing 1.53 N N
47 C74 C73 C C sing 1.51 N N
48 C09 C08 C C sing 1.53 N N
49 C55 O71 C O doub 1.21 N N
50 C55 O54 C O sing 1.34 N N
51 C08 C07 C C sing 1.53 N N
52 O54 C53 O C sing 1.45 N N
53 C73 O91 C O doub 1.21 N N
54 C73 O72 C O sing 1.34 N N
55 C26 C25 C C sing 1.53 N N
56 C25 C24 C C sing 1.51 N N
57 C53 C52 C C sing 1.53 N N
58 O72 C52 O C sing 1.45 N N
59 C06 C07 C C sing 1.53 N N
60 C06 C05 C C sing 1.53 N N
61 C04 C05 C C sing 1.53 N N
62 C04 C03 C C sing 1.53 N N
63 C52 C51 C C sing 1.53 N N
64 C03 C02 C C sing 1.51 N N
65 O01 C02 O C doub 1.21 N N
66 C24 O23 C O sing 1.34 N N
67 C24 O40 C O doub 1.21 N N
68 C02 O20 C O sing 1.34 N N
69 O23 C22 O C sing 1.45 N N
70 C51 O50 C O sing 1.43 N N
71 C21 O20 C O sing 1.45 N N
72 C21 C22 C C sing 1.53 N N
73 C21 C41 C C sing 1.53 N N
74 O50 P49 O P sing 1.61 N N
75 C41 O42 C O sing 1.43 N N
76 O95 P43 O P doub 1.48 N N
77 P49 O93 P O doub 1.48 N N
78 P49 O92 P O sing 1.61 N N
79 P49 O48 P O sing 1.61 N N
80 O42 P43 O P sing 1.61 N N
81 P43 O44 P O sing 1.61 N N
82 P43 O96 P O sing 1.61 N N
83 C47 O48 C O sing 1.43 N N
84 C47 C46 C C sing 1.53 N N
85 O44 C45 O C sing 1.43 N N
86 O94 C46 O C sing 1.43 N N
87 C46 C45 C C sing 1.53 N N
88 C03 H1 C H sing 1.09 N N
89 C03 H2 C H sing 1.09 N N
90 C04 H3 C H sing 1.09 N N
91 C04 H4 C H sing 1.09 N N
92 C05 H5 C H sing 1.09 N N
93 C05 H6 C H sing 1.09 N N
94 C06 H7 C H sing 1.09 N N
95 C06 H8 C H sing 1.09 N N
96 C07 H9 C H sing 1.09 N N
97 C07 H10 C H sing 1.09 N N
98 C08 H11 C H sing 1.09 N N
99 C08 H12 C H sing 1.09 N N
100 C09 H13 C H sing 1.09 N N
101 C09 H14 C H sing 1.09 N N
102 C10 H15 C H sing 1.08 N N
103 C11 H16 C H sing 1.08 N N
104 C12 H17 C H sing 1.09 N N
105 C12 H18 C H sing 1.09 N N
106 C13 H19 C H sing 1.09 N N
107 C13 H20 C H sing 1.09 N N
108 C14 H21 C H sing 1.09 N N
109 C14 H22 C H sing 1.09 N N
110 C15 H23 C H sing 1.09 N N
111 C15 H24 C H sing 1.09 N N
112 C16 H25 C H sing 1.09 N N
113 C16 H26 C H sing 1.09 N N
114 C17 H27 C H sing 1.09 N N
115 C17 H28 C H sing 1.09 N N
116 C18 H29 C H sing 1.09 N N
117 C18 H30 C H sing 1.09 N N
118 C19 H31 C H sing 1.09 N N
119 C19 H32 C H sing 1.09 N N
120 C19 H33 C H sing 1.09 N N
121 C21 H34 C H sing 1.09 N N
122 C22 H35 C H sing 1.09 N N
123 C22 H36 C H sing 1.09 N N
124 C25 H37 C H sing 1.09 N N
125 C25 H38 C H sing 1.09 N N
126 C26 H39 C H sing 1.09 N N
127 C26 H40 C H sing 1.09 N N
128 C27 H41 C H sing 1.09 N N
129 C27 H42 C H sing 1.09 N N
130 C28 H43 C H sing 1.09 N N
131 C28 H44 C H sing 1.09 N N
132 C29 H45 C H sing 1.09 N N
133 C29 H46 C H sing 1.09 N N
134 C30 H47 C H sing 1.09 N N
135 C30 H48 C H sing 1.09 N N
136 C31 H49 C H sing 1.09 N N
137 C31 H50 C H sing 1.09 N N
138 C32 H51 C H sing 1.09 N N
139 C32 H52 C H sing 1.09 N N
140 C33 H53 C H sing 1.09 N N
141 C33 H54 C H sing 1.09 N N
142 C34 H55 C H sing 1.09 N N
143 C34 H56 C H sing 1.09 N N
144 C35 H57 C H sing 1.09 N N
145 C35 H58 C H sing 1.09 N N
146 C36 H59 C H sing 1.09 N N
147 C36 H60 C H sing 1.09 N N
148 C37 H61 C H sing 1.09 N N
149 C37 H62 C H sing 1.09 N N
150 C38 H63 C H sing 1.09 N N
151 C38 H64 C H sing 1.09 N N
152 C39 H65 C H sing 1.09 N N
153 C39 H66 C H sing 1.09 N N
154 C39 H67 C H sing 1.09 N N
155 C41 H68 C H sing 1.09 N N
156 C41 H69 C H sing 1.09 N N
157 C45 H70 C H sing 1.09 N N
158 C45 H71 C H sing 1.09 N N
159 C46 H72 C H sing 1.09 N N
160 C47 H73 C H sing 1.09 N N
161 C47 H74 C H sing 1.09 N N
162 C51 H75 C H sing 1.09 N N
163 C51 H76 C H sing 1.09 N N
164 C52 H77 C H sing 1.09 N N
165 C53 H78 C H sing 1.09 N N
166 C53 H79 C H sing 1.09 N N
167 C56 H80 C H sing 1.09 N N
168 C56 H81 C H sing 1.09 N N
169 C57 H82 C H sing 1.09 N N
170 C57 H83 C H sing 1.09 N N
171 C58 H84 C H sing 1.09 N N
172 C58 H85 C H sing 1.09 N N
173 C59 H86 C H sing 1.09 N N
174 C59 H87 C H sing 1.09 N N
175 C60 H88 C H sing 1.09 N N
176 C60 H89 C H sing 1.09 N N
177 C61 H90 C H sing 1.09 N N
178 C61 H91 C H sing 1.09 N N
179 C62 H92 C H sing 1.09 N N
180 C62 H93 C H sing 1.09 N N
181 C74 H95 C H sing 1.09 N N
182 C74 H96 C H sing 1.09 N N
183 C75 H97 C H sing 1.09 N N
184 C75 H98 C H sing 1.09 N N
185 C76 H99 C H sing 1.09 N N
186 C76 H100 C H sing 1.09 N N
187 C77 H101 C H sing 1.09 N N
188 C77 H102 C H sing 1.09 N N
189 C78 H103 C H sing 1.09 N N
190 C78 H104 C H sing 1.09 N N
191 C79 H105 C H sing 1.09 N N
192 C79 H106 C H sing 1.09 N N
193 C80 H107 C H sing 1.09 N N
194 C80 H108 C H sing 1.09 N N
195 C81 H109 C H sing 1.08 N N
196 C82 H110 C H sing 1.08 N N
197 C83 H111 C H sing 1.09 N N
198 C83 H112 C H sing 1.09 N N
199 C84 H113 C H sing 1.09 N N
200 C84 H114 C H sing 1.09 N N
201 C85 H115 C H sing 1.09 N N
202 C85 H116 C H sing 1.09 N N
203 C86 H117 C H sing 1.09 N N
204 C86 H118 C H sing 1.09 N N
205 C87 H119 C H sing 1.09 N N
206 C87 H120 C H sing 1.09 N N
207 C88 H121 C H sing 1.09 N N
208 C88 H122 C H sing 1.09 N N
209 C89 H123 C H sing 1.09 N N
210 C89 H124 C H sing 1.09 N N
211 C90 H125 C H sing 1.09 N N
212 C90 H126 C H sing 1.09 N N
213 C90 H127 C H sing 1.09 N N
214 O92 H128 O H sing 0.97 N N
215 O94 H129 O H sing 0.97 N N
216 O96 H130 O H sing 0.97 N N
217 C62 C1 C C sing 1.53 N N
218 C1 C2 C C sing 1.53 N N
219 C2 C3 C C sing 1.53 N N
220 C3 C4 C C sing 1.53 N N
221 C4 C5 C C sing 1.53 N N
222 C5 C6 C C sing 1.53 N N
223 C6 C7 C C sing 1.53 N N
224 C7 C8 C C sing 1.53 N N
225 C1 H94 C H sing 1.09 N N
226 C1 H131 C H sing 1.09 N N
227 C2 H132 C H sing 1.09 N N
228 C2 H133 C H sing 1.09 N N
229 C3 H134 C H sing 1.09 N N
230 C3 H135 C H sing 1.09 N N
231 C4 H136 C H sing 1.09 N N
232 C4 H137 C H sing 1.09 N N
233 C5 H138 C H sing 1.09 N N
234 C5 H139 C H sing 1.09 N N
235 C6 H140 C H sing 1.09 N N
236 C6 H141 C H sing 1.09 N N
237 C7 H142 C H sing 1.09 N N
238 C7 H143 C H sing 1.09 N N
239 C8 H144 C H sing 1.09 N N
240 C8 H145 C H sing 1.09 N N
241 C8 H146 C H sing 1.09 N N