Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 7EK    

Bonds between two atoms of the molecule

Total Number of Bonds: 83


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C14 C15 C C doub 1.38 N Y
2 C14 C13 C C sing 1.38 N Y
3 C15 C16 C C sing 1.38 N Y
4 C13 C12 C C doub 1.39 N Y
5 C16 C17 C C doub 1.38 N Y
6 C12 C17 C C sing 1.39 N Y
7 C12 N11 C N sing 1.4 N N
8 N10 N11 N N sing 1.4 N Y
9 N10 N9 N N doub 1.29 N Y
10 N11 C7 N C sing 1.35 N Y
11 N9 C8 N C sing 1.34 N Y
12 C7 C6 C C sing 1.51 N N
13 C7 C8 C C doub 1.37 N Y
14 C6 C5 C C sing 1.53 N N
15 C8 C18 C C sing 1.47 N N
16 O19 C18 O C doub 1.22 N N
17 C18 N20 C N sing 1.35 N N
18 C5 C4 C C sing 1.53 N N
19 C4 C3 C C sing 1.53 N N
20 N20 C25 N C sing 1.47 N N
21 N20 C21 N C sing 1.46 N N
22 C3 O2 C O sing 1.43 N N
23 O2 C1 O C sing 1.43 N N
24 C31 C25 C C sing 1.53 N N
25 C31 C30 C C sing 1.53 N N
26 C25 C27 C C sing 1.53 N N
27 C21 C22 C C sing 1.53 N N
28 C22 C24 C C sing 1.53 N N
29 C22 C23 C C sing 1.53 N N
30 C30 C32 C C sing 1.51 N N
31 C30 C29 C C sing 1.53 N N
32 O33 C32 O C doub 1.21 N N
33 C32 N34 C N sing 1.35 N N
34 N34 C35 N C sing 1.47 N N
35 N34 C39 N C sing 1.47 N N
36 C35 C36 C C sing 1.53 N N
37 C39 C38 C C sing 1.53 N N
38 C27 N28 C N sing 1.47 N N
39 N28 C29 N C sing 1.47 N N
40 C38 O37 C O sing 1.43 N N
41 O37 C36 O C sing 1.43 N N
42 C4 H1 C H sing 1.09 N N
43 C4 H2 C H sing 1.09 N N
44 C5 H3 C H sing 1.09 N N
45 C5 H4 C H sing 1.09 N N
46 C6 H5 C H sing 1.09 N N
47 C6 H6 C H sing 1.09 N N
48 C13 H7 C H sing 1.08 N N
49 C15 H8 C H sing 1.08 N N
50 C17 H9 C H sing 1.08 N N
51 C21 H10 C H sing 1.09 N N
52 C21 H11 C H sing 1.09 N N
53 C22 H12 C H sing 1.09 N N
54 C24 H13 C H sing 1.09 N N
55 C24 H14 C H sing 1.09 N N
56 C24 H15 C H sing 1.09 N N
57 C1 H16 C H sing 1.09 N N
58 C1 H17 C H sing 1.09 N N
59 C1 H18 C H sing 1.09 N N
60 C3 H19 C H sing 1.09 N N
61 C3 H20 C H sing 1.09 N N
62 C14 H21 C H sing 1.08 N N
63 C16 H22 C H sing 1.08 N N
64 C23 H23 C H sing 1.09 N N
65 C23 H24 C H sing 1.09 N N
66 C23 H25 C H sing 1.09 N N
67 C25 H26 C H sing 1.09 N N
68 C27 H27 C H sing 1.09 N N
69 C27 H28 C H sing 1.09 N N
70 N28 H29 N H sing 1.01 N N
71 C29 H31 C H sing 1.09 N N
72 C29 H32 C H sing 1.09 N N
73 C30 H33 C H sing 1.09 N N
74 C31 H34 C H sing 1.09 N N
75 C31 H35 C H sing 1.09 N N
76 C35 H36 C H sing 1.09 N N
77 C35 H37 C H sing 1.09 N N
78 C36 H38 C H sing 1.09 N N
79 C36 H39 C H sing 1.09 N N
80 C38 H40 C H sing 1.09 N N
81 C38 H41 C H sing 1.09 N N
82 C39 H42 C H sing 1.09 N N
83 C39 H43 C H sing 1.09 N N