Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 600    

Bonds between two atoms of the molecule

Total Number of Bonds: 106


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.38 N Y
2 C1 C6 C C sing 1.38 N Y
3 C1 H1 C H sing 1.08 N N
4 C2 C3 C C sing 1.38 N Y
5 C2 H2 C H sing 1.08 N N
6 C3 C4 C C doub 1.38 N Y
7 C3 H3 C H sing 1.08 N N
8 C4 C5 C C sing 1.38 N Y
9 C4 C30 C C sing 1.51 N N
10 C5 C6 C C doub 1.38 N Y
11 C5 H5 C H sing 1.08 N N
12 C6 H6 C H sing 1.08 N N
13 C10 C11 C C doub 1.38 N Y
14 C10 C15 C C sing 1.38 N Y
15 C10 H10 C H sing 1.08 N N
16 C11 C12 C C sing 1.38 N Y
17 C11 C35 C C sing 1.51 N N
18 C12 C13 C C doub 1.38 N Y
19 C12 H12 C H sing 1.08 N N
20 C13 C14 C C sing 1.38 N Y
21 C13 H13 C H sing 1.08 N N
22 C14 C15 C C doub 1.38 N Y
23 C14 C52 C C sing 1.51 N N
24 C15 H15 C H sing 1.08 N N
25 C20 C21 C C doub 1.38 N Y
26 C20 C25 C C sing 1.38 N Y
27 C20 H20 C H sing 1.08 N N
28 C21 C22 C C sing 1.38 N Y
29 C21 C32 C C sing 1.51 N N
30 C22 C23 C C doub 1.38 N Y
31 C22 H22 C H sing 1.08 N N
32 C23 C24 C C sing 1.39 N Y
33 C23 H23 C H sing 1.08 N N
34 C24 C25 C C doub 1.39 N Y
35 C24 C68 C C sing 1.48 N Y
36 C25 H25 C H sing 1.08 N N
37 C30 N31 C N sing 1.47 N N
38 C30 C32 C C sing 1.53 N N
39 C30 C35 C C sing 1.53 N N
40 N31 C43 N C sing 1.37 N Y
41 N31 N47 N N sing 1.4 N Y
42 C32 H321 C H sing 1.09 N N
43 C32 H322 C H sing 1.09 N N
44 C35 H351 C H sing 1.09 N N
45 C35 H352 C H sing 1.09 N N
46 C40 C41 C C doub 1.36 N Y
47 C40 C45 C C sing 1.39 N Y
48 C40 H40 C H sing 1.08 N N
49 C41 C42 C C sing 1.4 N Y
50 C41 H41 C H sing 1.08 N N
51 C42 C43 C C doub 1.41 N Y
52 C42 N46 C N sing 1.35 N Y
53 C43 C44 C C sing 1.39 N Y
54 C44 C45 C C doub 1.38 N Y
55 C44 H44 C H sing 1.08 N N
56 C45 H45 C H sing 1.08 N N
57 N46 N47 N N doub 1.29 N Y
58 C52 F53 C F sing 1.4 N N
59 C52 F54 C F sing 1.4 N N
60 C52 P55 C P sing 1.82 N N
61 P55 O56 P O sing 1.61 N N
62 P55 O57 P O sing 1.61 N N
63 P55 O58 P O doub 1.48 N N
64 O56 H56 O H sing 0.97 N N
65 O57 H57 O H sing 0.97 N N
66 C61 C64 C C doub 1.4 N Y
67 C61 C68 C C sing 1.38 N Y
68 C61 H61 C H sing 1.08 N N
69 C62 C63 C C doub 1.37 N Y
70 C62 C67 C C sing 1.39 N Y
71 C62 H62 C H sing 1.08 N N
72 C63 C64 C C sing 1.41 N Y
73 C63 H63 C H sing 1.08 N N
74 C64 C65 C C sing 1.42 N Y
75 C65 N66 C N sing 1.34 N Y
76 C65 C70 C C doub 1.41 N Y
77 N66 C67 N C doub 1.31 N Y
78 C67 C71 C C sing 1.51 N N
79 C68 C69 C C doub 1.4 N Y
80 C69 C70 C C sing 1.36 N Y
81 C69 H69 C H sing 1.08 N N
82 C70 P79 C P sing 1.81 N N
83 P79 O80 P O sing 1.61 N N
84 P79 O81 P O sing 1.61 N N
85 P79 O82 P O doub 1.48 N N
86 O80 H80 O H sing 0.97 N N
87 O81 H81 O H sing 0.97 N N
88 C76 O77 C O sing 1.43 N N
89 C76 H761 C H sing 1.09 N N
90 C76 H762 C H sing 1.09 N N
91 C76 H763 C H sing 1.09 N N
92 O77 C71 O C sing 1.43 N N
93 C71 C72 C C sing 1.53 N N
94 C71 H71 C H sing 1.09 N N
95 C72 C73 C C sing 1.53 N N
96 C72 H721 C H sing 1.09 N N
97 C72 H722 C H sing 1.09 N N
98 C73 C74 C C sing 1.53 N N
99 C73 C75 C C sing 1.53 N N
100 C73 H73 C H sing 1.09 N N
101 C74 H741 C H sing 1.09 N N
102 C74 H742 C H sing 1.09 N N
103 C74 H743 C H sing 1.09 N N
104 C75 H751 C H sing 1.09 N N
105 C75 H752 C H sing 1.09 N N
106 C75 H753 C H sing 1.09 N N