Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
32D
Bonds between two atoms of the molecule
Total Number of Bonds: 52
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C1
C2
C
C
sing
1.39
N
Y
2
C1
C6
C
C
doub
1.38
N
Y
3
C2
C3
C
C
doub
1.37
N
Y
4
C3
C4
C
C
sing
1.4
N
Y
5
C3
C10
C
C
sing
1.51
N
N
6
C4
C5
C
C
doub
1.4
N
Y
7
C4
C8
C
C
sing
1.48
N
N
8
C5
C6
C
C
sing
1.38
N
Y
9
C5
F7
C
F
sing
1.35
N
N
10
C8
N9
C
N
doub
1.3
N
N
11
C8
N34
C
N
sing
1.38
N
N
12
N9
C10
N
C
sing
1.47
N
N
13
C10
C11
C
C
sing
1.51
N
N
14
C10
C24
C
C
sing
1.51
N
N
15
C11
C12
C
C
sing
1.38
N
Y
16
C11
C16
C
C
doub
1.38
N
Y
17
C12
C13
C
C
doub
1.38
N
Y
18
C13
C14
C
C
sing
1.38
N
Y
19
C14
C15
C
C
doub
1.39
N
Y
20
C15
C16
C
C
sing
1.39
N
Y
21
C15
C17
C
C
sing
1.49
N
N
22
C17
C18
C
C
doub
1.4
N
Y
23
C17
C22
C
C
sing
1.4
N
Y
24
C18
N19
C
N
sing
1.32
N
Y
25
N19
C20
N
C
doub
1.32
N
Y
26
C20
N21
C
N
sing
1.32
N
Y
27
N21
C22
N
C
doub
1.32
N
Y
28
C24
C25
C
C
doub
1.39
N
Y
29
C24
C29
C
C
sing
1.39
N
Y
30
C25
C26
C
C
sing
1.38
N
Y
31
C26
N27
C
N
doub
1.32
N
Y
32
N27
C28
N
C
sing
1.32
N
Y
33
C28
C29
C
C
doub
1.38
N
Y
34
C28
C30
C
C
sing
1.51
N
N
35
C30
F31
C
F
sing
1.4
N
N
36
C30
F32
C
F
sing
1.4
N
N
37
C1
H1
C
H
sing
1.08
N
N
38
C2
H2
C
H
sing
1.08
N
N
39
C6
H6
C
H
sing
1.08
N
N
40
N34
H341
N
H
sing
0.97
N
N
41
N34
H342
N
H
sing
0.97
N
N
42
C12
H12
C
H
sing
1.08
N
N
43
C16
H16
C
H
sing
1.08
N
N
44
C13
H13
C
H
sing
1.08
N
N
45
C14
H14
C
H
sing
1.08
N
N
46
C18
H18
C
H
sing
1.08
N
N
47
C22
H22
C
H
sing
1.08
N
N
48
C20
H20
C
H
sing
1.08
N
N
49
C25
H25
C
H
sing
1.08
N
N
50
C29
H29
C
H
sing
1.08
N
N
51
C26
H26
C
H
sing
1.08
N
N
52
C30
H30
C
H
sing
1.09
N
N