Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 30B    

Bonds between two atoms of the molecule

Total Number of Bonds: 105


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.54 N N
2 C1 C5 C C sing 1.54 N N
3 C2 C3 C C sing 1.54 N N
4 C2 C9 C C sing 1.5 N N
5 C3 C4 C C sing 1.54 N N
6 C3 C6 C C sing 1.5 N N
7 C4 C5 C C sing 1.54 N N
8 C5 O23 C O sing 1.43 N N
9 C6 O7 C O doub 1.21 N N
10 C6 N8 C N sing 1.35 N N
11 N8 C16 N C sing 1.47 N N
12 C9 O10 C O doub 1.21 N N
13 C9 N13 C N sing 1.38 N N
14 C11 C16 C C sing 1.53 N N
15 C11 C17 C C sing 1.53 N N
16 C11 C18 C C sing 1.5 N N
17 C12 C16 C C sing 1.51 N N
18 C12 N45 C N sing 1.35 N N
19 C12 O46 C O doub 1.21 N N
20 N13 C14 N C sing 1.48 N N
21 N13 C15 N C sing 1.47 N N
22 C14 C19 C C sing 1.53 N N
23 C16 C17 C C sing 1.53 N N
24 C18 C22 C C doub 1.31 N N
25 C19 C20 C C sing 1.53 N N
26 C20 C21 C C sing 1.53 N N
27 C21 C22 C C sing 1.51 N N
28 O23 C30 O C sing 1.36 N N
29 C24 C25 C C doub 1.4 N Y
30 C24 C29 C C sing 1.38 N Y
31 C24 O42 C O sing 1.36 N N
32 C25 C26 C C sing 1.36 N Y
33 C26 C27 C C doub 1.4 N Y
34 C27 C28 C C sing 1.42 N Y
35 C27 C30 C C sing 1.41 N Y
36 C28 C29 C C doub 1.4 N Y
37 C28 N33 C N sing 1.34 N Y
38 C29 C44 C C sing 1.51 N N
39 C30 C31 C C doub 1.37 N Y
40 C31 C32 C C sing 1.4 Z Y
41 C32 N33 C N doub 1.32 N Y
42 C32 C34 C C sing 1.48 N Y
43 C34 S35 C S sing 1.76 N Y
44 C34 N38 C N doub 1.3 N Y
45 S35 C36 S C sing 1.76 N Y
46 C36 C37 C C doub 1.34 N Y
47 C37 N38 C N sing 1.31 N Y
48 C37 C39 C C sing 1.51 N N
49 C39 C40 C C sing 1.53 N N
50 C39 C41 C C sing 1.53 N N
51 O42 C43 O C sing 1.43 N N
52 N45 S47 N S sing 1.66 N N
53 S47 C48 S C sing 1.81 N N
54 S47 O49 S O doub 1.42 N N
55 S47 O50 S O doub 1.42 N N
56 C48 C51 C C sing 1.53 N N
57 C48 C52 C C sing 1.53 N N
58 C51 C52 C C sing 1.53 N N
59 C1 H1 C H sing 1.09 N N
60 C1 H1A C H sing 1.09 N N
61 C2 H2 C H sing 1.09 N N
62 C3 H3 C H sing 1.09 N N
63 C4 H4 C H sing 1.09 N N
64 C4 H4A C H sing 1.09 N N
65 C5 H5 C H sing 1.09 N N
66 N8 HN8 N H sing 0.97 N N
67 C11 H11 C H sing 1.09 N N
68 C14 H14 C H sing 1.09 N N
69 C14 H14A C H sing 1.09 N N
70 C15 H15 C H sing 1.09 N N
71 C15 H15A C H sing 1.09 N N
72 C15 H15B C H sing 1.09 N N
73 C17 H17 C H sing 1.09 N N
74 C17 H17A C H sing 1.09 N N
75 C18 H18 C H sing 1.08 N N
76 C19 H19 C H sing 1.09 N N
77 C19 H19A C H sing 1.09 N N
78 C20 H20 C H sing 1.09 N N
79 C20 H20A C H sing 1.09 N N
80 C21 H21 C H sing 1.09 N N
81 C21 H21A C H sing 1.09 N N
82 C22 H22 C H sing 1.08 N N
83 C25 H25 C H sing 1.08 N N
84 C26 H26 C H sing 1.08 N N
85 C31 H31 C H sing 1.08 N N
86 C36 H36 C H sing 1.08 N N
87 C39 H39 C H sing 1.09 N N
88 C40 H40 C H sing 1.09 N N
89 C40 H40A C H sing 1.09 N N
90 C40 H40B C H sing 1.09 N N
91 C41 H41 C H sing 1.09 N N
92 C41 H41A C H sing 1.09 N N
93 C41 H41B C H sing 1.09 N N
94 C43 H43 C H sing 1.09 N N
95 C43 H43A C H sing 1.09 N N
96 C43 H43B C H sing 1.09 N N
97 C44 H44 C H sing 1.09 N N
98 C44 H44A C H sing 1.09 N N
99 C44 H44B C H sing 1.09 N N
100 N45 HN45 N H sing 0.97 N N
101 C48 H48 C H sing 1.09 N N
102 C51 H51 C H sing 1.09 N N
103 C51 H51A C H sing 1.09 N N
104 C52 H52 C H sing 1.09 N N
105 C52 H52A C H sing 1.09 N N