Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 2XB    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OT1 CT5 O C doub 1.21 N N
2 CT5 CT1 C C sing 1.51 N N
3 CT5 OXT C O sing 1.34 N N
4 NAA CAW N C sing 1.39 N N
5 CT1 CT2 C C sing 1.53 N N
6 CT1 NT1 C N sing 1.47 N N
7 CT2 CT3 C C sing 1.53 N N
8 CAW NAS C N sing 1.33 N Y
9 CAW NAP C N doub 1.32 N Y
10 OAD CAV O C doub 1.22 N N
11 NAS CBA N C doub 1.33 N Y
12 OE2 CT4 O C doub 1.21 N N
13 NT1 CAV N C sing 1.35 N N
14 CAV CAY C C sing 1.48 N N
15 CT3 CT4 C C sing 1.51 N N
16 NAP CBB N C sing 1.33 N Y
17 CT4 OE1 C O sing 1.34 N N
18 CAJ CAY C C doub 1.4 N Y
19 CAJ CAH C C sing 1.38 N Y
20 CBA OAE C O sing 1.35 N N
21 CBA CBC C C sing 1.4 N Y
22 CAY CAK C C sing 1.4 N Y
23 CBB CBC C C doub 1.41 N Y
24 CBB NAR C N sing 1.37 N Y
25 CAH CAX C C doub 1.38 N Y
26 CBC CAZ C C sing 1.46 N Y
27 CAK CAI C C doub 1.38 N Y
28 NAR CAL N C sing 1.37 N Y
29 CAX CAI C C sing 1.38 N Y
30 CAX CAO C C sing 1.51 N N
31 CAZ CAL C C doub 1.34 N Y
32 CAZ CAO C C sing 1.51 N N
33 OE1 H1 O H sing 0.97 N N
34 CT3 H2 C H sing 1.09 N N
35 CT2 H3 C H sing 1.09 N N
36 CT1 H4 C H sing 1.09 N N
37 OXT H5 O H sing 0.97 N N
38 NT1 H6 N H sing 0.97 N N
39 CAJ H7 C H sing 1.08 N N
40 CAH H8 C H sing 1.08 N N
41 CAK H9 C H sing 1.08 N N
42 CAI H10 C H sing 1.08 N N
43 CAO H11 C H sing 1.09 N N
44 CAO H12 C H sing 1.09 N N
45 NAA H14 N H sing 0.97 N N
46 NAA H15 N H sing 0.97 N N
47 NAR H16 N H sing 0.97 N N
48 CAL H17 C H sing 1.08 N N
49 CT3 H18 C H sing 1.09 N N
50 CT2 H19 C H sing 1.09 N N
51 OAE H20 O H sing 0.97 N N