Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 1A1    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C19 C18 C C doub 1.38 N Y
2 C19 N20 C N sing 1.32 N Y
3 C18 C17 C C sing 1.38 N Y
4 N20 C21 N C doub 1.32 N Y
5 C17 C16 C C doub 1.4 N Y
6 C21 C16 C C sing 1.4 N Y
7 C16 C14 C C sing 1.48 N N
8 C14 N13 C N doub 1.29 N Y
9 C14 S15 C S sing 1.76 N Y
10 N13 C3 N C sing 1.34 N Y
11 S15 C2 S C sing 1.76 N Y
12 C26 C25 C C doub 1.35 N Y
13 C26 N22 C N sing 1.37 N Y
14 C3 C2 C C doub 1.4 N Y
15 C3 C4 C C sing 1.42 N Y
16 C25 N24 C N sing 1.34 N Y
17 C2 N1 C N sing 1.33 N Y
18 N22 C4 N C sing 1.39 N N
19 N22 C23 N C sing 1.36 N Y
20 C4 N5 C N doub 1.32 N Y
21 N24 C23 N C doub 1.31 N Y
22 N1 C6 N C doub 1.32 N Y
23 N5 C6 N C sing 1.33 N Y
24 C6 N7 C N sing 1.39 N N
25 N7 C8 N C sing 1.35 N N
26 O9 C8 O C doub 1.21 N N
27 C8 C10 C C sing 1.51 N N
28 C10 C12 C C sing 1.53 N N
29 C10 C11 C C sing 1.53 N N
30 C12 C11 C C sing 1.53 N N
31 C10 H1 C H sing 1.09 N N
32 C12 H2 C H sing 1.09 N N
33 C12 H3 C H sing 1.09 N N
34 C11 H4 C H sing 1.09 N N
35 C11 H5 C H sing 1.09 N N
36 N7 H6 N H sing 0.97 N N
37 C26 H7 C H sing 1.08 N N
38 C25 H8 C H sing 1.08 N N
39 C23 H9 C H sing 1.08 N N
40 C21 H10 C H sing 1.08 N N
41 C19 H11 C H sing 1.08 N N
42 C18 H12 C H sing 1.08 N N
43 C17 H13 C H sing 1.08 N N