Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
11V
Bonds between two atoms of the molecule
Total Number of Bonds: 65
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
OAX
CAN
O
C
sing
1.43
N
N
2
OAX
CAM
O
C
sing
1.43
N
N
3
CAN
CAQ
C
C
sing
1.53
N
N
4
CAQ
NBG
C
N
sing
1.47
N
N
5
CAC
CAG
C
C
doub
1.38
N
Y
6
CAC
CAF
C
C
sing
1.38
N
Y
7
CAG
CAK
C
C
sing
1.38
N
Y
8
CAF
CAJ
C
C
doub
1.38
N
Y
9
CAM
CAP
C
C
sing
1.53
N
N
10
CAP
NBG
C
N
sing
1.47
N
N
11
NBG
CAR
N
C
sing
1.47
N
N
12
CAK
CBA
C
C
doub
1.38
N
Y
13
CAR
CAO
C
C
sing
1.53
N
N
14
CAJ
CBA
C
C
sing
1.38
N
Y
15
CBA
CBF
C
C
sing
1.51
N
N
16
CAS
CBF
C
C
sing
1.53
N
N
17
CAS
NBH
C
N
sing
1.47
N
N
18
CBF
CLA
C
CL
sing
1.8
N
N
19
CAO
SAY
C
S
sing
1.81
N
N
20
NBH
C4
N
C
sing
1.36
N
Y
21
NBH
NAT
N
N
sing
1.4
N
Y
22
N3
C4
N
C
doub
1.33
N
Y
23
N3
C2
N
C
sing
1.32
N
Y
24
SAY
C2
S
C
sing
1.76
N
N
25
C4
C5
C
C
sing
1.41
N
Y
26
C2
N1
C
N
doub
1.33
N
Y
27
NAT
CAL
N
C
doub
1.3
N
Y
28
C5
CAL
C
C
sing
1.41
N
Y
29
C5
C6
C
C
doub
1.41
N
Y
30
N1
C6
N
C
sing
1.33
N
Y
31
C6
NAW
C
N
sing
1.38
N
N
32
NAW
CAZ
N
C
sing
1.4
N
N
33
CAH
CAZ
C
C
doub
1.39
N
Y
34
CAH
CAD
C
C
sing
1.38
N
Y
35
CAZ
CAI
C
C
sing
1.39
N
Y
36
CAD
CAB
C
C
doub
1.38
N
Y
37
CAI
CAE
C
C
doub
1.38
N
Y
38
CAB
CAE
C
C
sing
1.38
N
Y
39
CAP
H1
C
H
sing
1.09
N
N
40
CAP
H2
C
H
sing
1.09
N
N
41
CAM
H3
C
H
sing
1.09
N
N
42
CAM
H4
C
H
sing
1.09
N
N
43
CAN
H5
C
H
sing
1.09
N
N
44
CAN
H6
C
H
sing
1.09
N
N
45
CAQ
H7
C
H
sing
1.09
N
N
46
CAQ
H8
C
H
sing
1.09
N
N
47
CAR
H10
C
H
sing
1.09
N
N
48
CAR
H11
C
H
sing
1.09
N
N
49
CAO
H12
C
H
sing
1.09
N
N
50
CAO
H13
C
H
sing
1.09
N
N
51
NAW
H14
N
H
sing
0.97
N
N
52
CAH
H15
C
H
sing
1.08
N
N
53
CAD
H16
C
H
sing
1.08
N
N
54
CAB
H17
C
H
sing
1.08
N
N
55
CAE
H18
C
H
sing
1.08
N
N
56
CAI
H19
C
H
sing
1.08
N
N
57
CAL
H20
C
H
sing
1.08
N
N
58
CAS
H21
C
H
sing
1.09
N
N
59
CAS
H22
C
H
sing
1.09
N
N
60
CBF
H23
C
H
sing
1.09
N
N
61
CAJ
H24
C
H
sing
1.08
N
N
62
CAF
H25
C
H
sing
1.08
N
N
63
CAC
H26
C
H
sing
1.08
N
N
64
CAG
H27
C
H
sing
1.08
N
N
65
CAK
H28
C
H
sing
1.08
N
N