Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0I7    

Bonds between two atoms of the molecule

Total Number of Bonds: 105


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O10 C6 O C sing 1.36 N N
2 O9 C7 O C doub 1.21 N N
3 C6 C1 C C doub 1.3 N N
4 C6 C5 C C sing 1.5 N N
5 C21 C16 C C sing 1.51 N N
6 C7 C5 C C sing 1.51 N N
7 C7 C8 C C sing 1.47 N N
8 C1 C2 C C sing 1.5 N N
9 C5 C4 C C sing 1.51 N N
10 C16 C8 C C doub 1.4 N Y
11 C16 C15 C C sing 1.39 N Y
12 N31 N30 N N doub 1.29 N Y
13 N31 N27 N N sing 1.29 N Y
14 O24 C20 O C doub 1.22 N N
15 C8 C12 C C sing 1.4 N Y
16 N30 C29 N C sing 1.34 N Y
17 C26 N27 C N sing 1.47 N N
18 C26 C25 C C sing 1.53 N N
19 N27 C28 N C sing 1.35 N Y
20 C4 C3 C C sing 1.52 N N
21 C4 O11 C O doub 1.21 N N
22 C20 C15 C C sing 1.47 N N
23 C20 N19 C N sing 1.35 N N
24 C2 C3 C C sing 1.53 N N
25 C15 C14 C C doub 1.41 N Y
26 C12 C13 C C doub 1.37 N Y
27 C29 C28 C C doub 1.35 N Y
28 C29 C32 C C sing 1.51 N N
29 C25 N19 C N sing 1.47 N N
30 N19 C18 N C sing 1.34 N N
31 C32 O33 C O sing 1.43 N N
32 C14 C13 C C sing 1.39 N Y
33 C14 N17 C N sing 1.38 N N
34 O33 C34 O C sing 1.36 N N
35 C18 N17 C N sing 1.34 N N
36 C18 O23 C O doub 1.22 N N
37 N17 C22 N C sing 1.46 N N
38 C35 C34 C C doub 1.39 N Y
39 C35 C36 C C sing 1.38 N Y
40 C34 C39 C C sing 1.39 N Y
41 C36 C37 C C doub 1.38 N Y
42 C54 C44 C C sing 1.51 N N
43 C39 C38 C C doub 1.38 N Y
44 F53 B51 F B sing 1.37 N N
45 C45 C44 C C doub 1.35 N Y
46 C45 C46 C C sing 1.41 N Y
47 C44 N43 C N sing 1.36 N Y
48 C37 C38 C C sing 1.38 N Y
49 C37 C40 C C sing 1.51 N N
50 C46 C55 C C sing 1.51 N N
51 C46 C41 C C doub 1.35 N Y
52 N43 B51 N B sing 1.51 N N
53 N43 C41 N C sing 1.37 N Y
54 B51 F52 B F sing 1.37 N N
55 B51 N50 B N sing 1.51 N N
56 C41 C40 C C sing 1.51 N N
57 C40 C42 C C sing 1.51 N N
58 N50 C42 N C sing 1.37 N Y
59 N50 C49 N C sing 1.36 N Y
60 C42 C47 C C doub 1.35 N Y
61 C56 C49 C C sing 1.51 N N
62 C49 C48 C C doub 1.35 N Y
63 C47 C48 C C sing 1.41 N Y
64 C47 C57 C C sing 1.51 N N
65 C13 H1 C H sing 1.08 N N
66 C21 H2 C H sing 1.09 N N
67 C21 H3 C H sing 1.09 N N
68 C21 H4 C H sing 1.09 N N
69 C22 H5 C H sing 1.09 N N
70 C22 H6 C H sing 1.09 N N
71 C22 H7 C H sing 1.09 N N
72 C26 H8 C H sing 1.09 N N
73 C26 H9 C H sing 1.09 N N
74 C28 H10 C H sing 1.08 N N
75 C1 H11 C H sing 1.08 N N
76 C2 H12 C H sing 1.09 N N
77 C2 H13 C H sing 1.09 N N
78 C3 H14 C H sing 1.09 N N
79 C3 H15 C H sing 1.09 N N
80 C5 H16 C H sing 1.09 N N
81 C12 H17 C H sing 1.08 N N
82 C25 H18 C H sing 1.09 N N
83 C25 H19 C H sing 1.09 N N
84 C32 H20 C H sing 1.09 N N
85 C32 H21 C H sing 1.09 N N
86 C35 H22 C H sing 1.08 N N
87 C36 H23 C H sing 1.08 N N
88 C38 H24 C H sing 1.08 N N
89 C39 H25 C H sing 1.08 N N
90 C40 H26 C H sing 1.09 N N
91 C45 H27 C H sing 1.08 N N
92 C48 H28 C H sing 1.08 N N
93 C54 H29 C H sing 1.09 N N
94 C54 H30 C H sing 1.09 N N
95 C54 H31 C H sing 1.09 N N
96 C55 H32 C H sing 1.09 N N
97 C55 H33 C H sing 1.09 N N
98 C55 H34 C H sing 1.09 N N
99 C56 H35 C H sing 1.09 N N
100 C56 H36 C H sing 1.09 N N
101 C56 H37 C H sing 1.09 N N
102 C57 H38 C H sing 1.09 N N
103 C57 H39 C H sing 1.09 N N
104 C57 H40 C H sing 1.09 N N
105 O10 H41 O H sing 0.97 N N