Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : ZPH

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 -2.221 -1.045 0.372
2 C2 C C2 N N N 0 -3.169 0.081 -0.044
3 C3 C C3 N N N 0 -4.446 -0.52 -0.634
4 C4 C C4 N N N 0 -5.45 0.599 -0.924
5 C5 C C5 N N N 0 -4.112 -1.254 -1.934
6 N N N1 N N N 0 -2.854 -1.856 1.42
7 P1 P P1 N N N 0 -0.671 -0.329 1.011
8 O1 O O1 N N N 0 -0.978 0.607 2.115
9 O2 O O2 N N N 0 0.28 -1.509 1.556
10 C6 C C6 S N N 0 1.301 1.181 0.026
11 C7 C C7 N N N 0 2.337 0.719 -1.0
12 C8 C C8 N Y N 0 2.681 -0.727 -0.75
13 C9 C C9 N Y N 0 1.957 -1.727 -1.373
14 C10 C C10 N Y N 0 3.723 -1.054 0.097
15 C11 C C11 N Y N 0 2.272 -3.053 -1.144
16 C12 C C12 N Y N 0 4.038 -2.38 0.326
17 C13 C C13 N Y N 0 3.311 -3.38 -0.292
18 C14 C C14 N N N 0 1.049 2.657 -0.145
19 O3 O O3 N N N 0 0.081 0.464 -0.171
20 C15 C C15 N N N 0 1.72 4.944 -0.097
21 O4 O O4 N N N 0 2.034 3.538 0.088
22 O5 O O5 N N N 0 -0.041 3.048 -0.491
23 H1 H H1 N N N 0 -2.002 -1.674 -0.491
24 H H H2 N N N 0 -3.421 0.685 0.828
25 H6 H H6 N N N 0 -6.359 0.171 -1.344
26 H3 H H3 N N N 0 -2.683 0.707 -0.792
27 H4 H H4 N N N 0 -4.881 -1.222 0.078
28 H5 H H5 N N N 0 -5.015 1.3 -1.636
29 H7 H H7 N N N 0 -5.688 1.122 0.002
30 H8 H H8 N N N 0 -3.347 -2.007 -1.74
31 H9 H H9 N N N 0 -5.009 -1.739 -2.319
32 H10 H H10 N N N 0 -3.74 -0.54 -2.669
33 H11 H H11 N N N 0 -3.067 -1.296 2.232
34 H12 H H12 N N N 0 0.523 -2.161 0.884
35 H13 H H13 N N N 0 1.676 0.991 1.032
36 H14 H H14 N N N 0 1.927 0.827 -2.004
37 H15 H H15 N N N 0 3.237 1.327 -0.908
38 H16 H H16 N N N 0 1.146 -1.472 -2.039
39 H17 H H17 N N N 0 4.291 -0.272 0.581
40 H18 H H18 N N N 0 1.707 -3.834 -1.63
41 H19 H H19 N N N 0 4.852 -2.635 0.988
42 H20 H H20 N N N 0 3.557 -4.416 -0.113
43 H21 H H21 N N N 0 2.602 5.545 0.123
44 H22 H H22 N N N 0 1.412 5.114 -1.128
45 H23 H H23 N N N 0 0.91 5.226 0.576
46 H2 H H24 N N Y 0 -3.682 -2.316 1.071