Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : ZMM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C11 C C1 N Y N 0 -0.171 -0.502 0.829
2 C13 C C2 N Y N 0 -1.531 -2.108 1.991
3 C14 C C3 N Y N 0 -2.663 -1.579 1.4
4 C16 C C4 N Y N 0 -1.313 0.038 0.241
5 C17 C C5 N N N 0 -5.049 -0.545 0.061
6 C18 C C6 N N N 0 -5.88 0.088 -1.077
7 C19 C C7 N N N 0 -5.126 1.416 -1.318
8 C01 C C8 N N N 0 1.467 1.336 0.903
9 C02 C C9 N N N 0 3.662 1.234 0.004
10 C03 C C10 N Y N 0 3.432 -0.146 -0.439
11 C04 C C11 N Y N 0 4.412 -0.879 -1.106
12 C08 C C15 N Y N 0 2.171 -0.73 -0.185
13 C05 C C12 N Y N 0 4.143 -2.171 -1.5
14 C06 C C13 N Y N 0 2.908 -2.75 -1.24
15 C07 C C14 N Y N 0 1.925 -2.043 -0.582
16 C09 C C16 N N N 0 1.162 0.069 0.527
17 C10 C C17 N N N 0 2.927 3.275 1.079
18 C12 C C18 N Y N 0 -0.288 -1.58 1.707
19 C15 C C19 N Y N 0 -2.557 -0.502 0.528
20 C20 C C20 N N N 0 -3.72 1.137 -0.833
21 N01 N N1 N N N 0 2.681 1.898 0.645
22 N02 N N2 N N N 0 -3.706 0.031 -0.068
23 O01 O O1 N N N 0 4.733 1.775 -0.206
24 O02 O O2 N N N 0 -2.747 1.811 -1.096
25 H4 H H4 N N N 0 -5.478 -0.288 1.03
26 H1 H H1 N N N 0 -1.618 -2.945 2.668
27 H2 H H2 N N N 0 -3.632 -2.004 1.615
28 H3 H H3 N N N 0 -1.229 0.876 -0.436
29 H5 H H5 N N N 0 -5.01 -1.628 -0.058
30 H6 H H6 N N N 0 -5.862 -0.539 -1.969
31 H7 H H7 N N N 0 -6.905 0.274 -0.754
32 H8 H H8 N N N 0 -5.121 1.664 -2.379
33 H9 H H9 N N N 0 -5.578 2.222 -0.74
34 H10 H H10 N N N 0 0.72 1.92 1.421
35 H11 H H11 N N N 0 5.375 -0.437 -1.313
36 H12 H H12 N N N 0 4.901 -2.741 -2.018
37 H13 H H13 N N N 0 2.715 -3.764 -1.556
38 H14 H H14 N N N 0 0.967 -2.5 -0.384
39 H15 H H15 N N N 0 3.341 3.269 2.088
40 H16 H H16 N N N 0 3.635 3.75 0.399
41 H17 H H17 N N N 0 1.99 3.831 1.075
42 H18 H H18 N N N 0 0.595 -2.002 2.164