Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : YTF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 -1.008 1.723 -0.833
2 CA C CA S N N 0 -0.979 0.626 0.143
3 CB C CB N N N 0 -2.22 -0.251 -0.038
4 CG C CG N N N 0 -3.471 0.561 0.303
5 CD C CD N N N 0 -4.694 -0.303 0.125
6 OE1 O OE1 N N N 0 -4.575 -1.454 -0.239
7 NE2 N NE2 N N N 0 -5.918 0.204 0.37
8 C C CX5 N N N 0 0.278 -0.219 -0.077
9 CX6 C CX6 N N N 0 1.518 0.625 0.226
10 CX7 C CX7 N N N 0 2.757 -0.207 0.009
11 OX8 O OX8 N N N 0 2.657 -1.356 -0.349
12 OX9 O OX9 N N N 0 3.97 0.33 0.216
13 CJ1 C CJ1 N N N 0 5.118 -0.53 -0.012
14 CJ2 C CJ2 N N N 0 6.403 0.25 0.272
15 H2 H H9 N N Y 0 -0.232 2.353 -0.693
16 H H H N N N 0 -1.018 1.367 -1.778
17 HA H HA N N N 0 -0.968 1.037 1.152
18 HB2 H HB2 N N N 0 -2.277 -0.59 -1.072
19 HB3 H HB3 N N N 0 -2.155 -1.114 0.625
20 HG2 H HG2 N N N 0 -3.414 0.9 1.337
21 HG3 H HG3 N N N 0 -3.536 1.423 -0.36
22 HE22 H HE22 N N N 0 -6.013 1.125 0.66
23 HE21 H HE21 N N N 0 -6.705 -0.351 0.255
24 H11 H H11 N N Y 0 0.256 -1.083 0.587
25 H1 H H1 N N N 0 0.312 -0.557 -1.112
26 H31 H H2 N N N 0 1.541 1.489 -0.438
27 H3 H H3 N N N 0 1.484 0.963 1.261
28 H4 H H4 N N N 0 5.062 -1.393 0.651
29 H5 H H5 N N N 0 5.119 -0.867 -1.048
30 H7 H H7 N N N 0 6.402 0.588 1.309
31 H8 H H8 N N N 0 7.265 -0.395 0.101
32 H6 H H6 N N N 0 6.458 1.113 -0.391