Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : YFN

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 29


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 2.134 0.23 0.161
2 C13 C C2 N N N 0 4.676 -0.249 -0.065
3 C01 C C3 N N N 0 0.015 2.261 0.402
4 C02 C C4 S N N 0 -0.242 0.758 0.279
5 C03 C C5 N N N 0 -0.473 0.412 -1.193
6 C04 C C6 N N N 0 -1.415 -0.818 -1.272
7 C08 C C7 N N N 0 -1.443 0.384 1.161
8 C12 C C8 N N N 0 3.35 -0.515 0.65
9 C14 C C9 N N N 0 3.947 -1.577 -0.275
10 N09 N N1 N N N 0 0.94 0.034 0.755
11 O06 O O1 N N N 0 -3.139 -1.605 0.616
12 O07 O O2 N N N 0 -3.556 0.57 -0.46
13 O11 O O3 N N N 0 2.231 1.009 -0.763
14 S05 S S1 N N N 0 -2.648 -0.407 0.029
15 H132 H H1 N N N 0 4.669 0.465 -0.889
16 H131 H H2 N N N 0 5.584 -0.262 0.538
17 H031 H H6 N N N 0 -0.934 1.26 -1.7
18 H013 H H3 N N N 0 0.23 2.509 1.441
19 H012 H H4 N N N 0 0.867 2.536 -0.221
20 H011 H H5 N N N 0 -0.868 2.809 0.072
21 H032 H H7 N N N 0 0.479 0.174 -1.667
22 H042 H H8 N N N 0 -1.888 -0.887 -2.252
23 H041 H H9 N N N 0 -0.881 -1.737 -1.031
24 H082 H H10 N N N 0 -1.138 -0.317 1.938
25 H081 H H11 N N N 0 -1.876 1.279 1.608
26 H121 H H12 N N N 0 3.385 -0.703 1.723
27 H142 H H13 N N N 0 3.46 -1.738 -1.237
28 H141 H H14 N N N 0 4.375 -2.466 0.19
29 H091 H H15 N N N 0 0.863 -0.586 1.497