Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : XLS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 0.359 0.09 -2.611
2 C2 C C2 R N N 0 -0.257 -0.408 -1.33
3 C3 C C3 S N N 0 0.602 0.033 -0.144
4 C4 C C4 R N N 0 -0.024 -0.472 1.156
5 C5 C C5 N N N 0 0.836 -0.031 2.341
6 O1 O O1 N N N 0 0.7 -0.695 -3.463
7 O2 O O2 N N N 0 -1.572 0.134 -1.192
8 O3 O O3 N N N 0 0.676 1.459 -0.114
9 O4 O O4 N N N 0 -1.339 0.069 1.293
10 O5 O O5 N N N 0 0.251 -0.504 3.556
11 H1 H H1 N N N 0 0.496 1.15 -2.768
12 H2 H H2 N N N 0 -0.314 -1.496 -1.353
13 H3 H H3 N N N 0 1.605 -0.38 -0.249
14 H4 H H4 N N N 0 -0.08 -1.561 1.133
15 H51 H H51 N N N 0 0.892 1.056 2.364
16 H52 H H52 N N N 0 1.839 -0.445 2.236
17 HO2 H HO2 N N N 0 -1.478 1.096 -1.176
18 HO3 H HO3 N N N 0 -0.229 1.784 -0.02
19 HO4 H HO4 N N N 0 -1.244 1.031 1.31
20 HO5 H HO5 N N N 0 0.822 -0.205 4.277