Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WYJ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -3.34 3.053 0.399
2 C21 C C2 N N N 0 2.62 1.623 -1.1
3 C01 C C3 N N N 0 3.852 -0.495 2.404
4 C02 C C4 R N N 0 3.0 -0.06 1.21
5 C03 C C5 N N N 0 1.75 -0.939 1.127
6 C05 C C6 N Y N 0 -0.194 -1.305 -0.146
7 C06 C C7 N Y N 0 -1.443 -0.679 -0.066
8 C07 C C8 N Y N 0 -1.893 0.711 0.101
9 C08 C C9 N Y N 0 -3.296 0.673 0.104
10 C09 C C10 N Y N 0 -4.01 1.858 0.248
11 C11 C C11 N Y N 0 -1.954 3.089 0.402
12 C12 C C12 N Y N 0 -1.229 1.927 0.255
13 C14 C C13 N Y N 0 -2.601 -1.467 -0.154
14 C16 C C14 N Y N 0 -1.267 -3.332 -0.382
15 C18 C C15 N N N 0 1.783 -0.725 -1.283
16 C19 C C16 S N N 0 3.033 0.152 -1.176
17 N04 N N1 N N N 0 0.974 -0.567 -0.065
18 N13 N N2 N Y N 0 -3.695 -0.644 -0.051
19 N15 N N3 N Y N 0 -2.462 -2.784 -0.311
20 N17 N N4 N Y N 0 -0.155 -2.626 -0.303
21 O20 O O1 N N N 0 3.758 -0.202 0.006
22 O22 O O2 N N N 0 3.788 2.447 -1.117
23 H101 H H1 N N N 0 -3.9 3.97 0.511
24 H211 H H2 N N N 0 1.99 1.868 -1.955
25 H212 H H3 N N N 0 2.066 1.798 -0.178
26 H012 H H4 N N N 0 4.149 -1.536 2.279
27 H013 H H5 N N N 0 4.743 0.132 2.463
28 H011 H H6 N N N 0 3.273 -0.389 3.322
29 H021 H H7 N N N 0 2.705 0.982 1.334
30 H032 H H8 N N N 0 2.045 -1.986 1.058
31 H031 H H9 N N N 0 1.14 -0.79 2.019
32 H091 H H10 N N N 0 -5.09 1.842 0.243
33 H111 H H11 N N N 0 -1.441 4.032 0.521
34 H121 H H12 N N N 0 -0.15 1.957 0.258
35 H161 H H13 N N N 0 -1.195 -4.402 -0.509
36 H182 H H14 N N N 0 1.198 -0.421 -2.15
37 H181 H H15 N N N 0 2.078 -1.769 -1.391
38 H191 H H16 N N N 0 3.664 -0.005 -2.051
39 H131 H H17 N N N 0 -4.618 -0.943 -0.081
40 H221 H H18 N N N 0 3.601 3.395 -1.072