Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WYG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -4.317 -1.729 -0.419
2 C17 C C2 N N N 0 1.246 -2.01 0.594
3 C02 C C3 N N N 0 4.704 0.287 -0.266
4 C03 C C4 N N N 0 3.402 0.982 0.039
5 C04 C C5 R N N 0 2.24 0.017 -0.207
6 C05 C C6 N N N 0 0.913 0.757 -0.019
7 C07 C C7 N Y N 0 -1.419 0.45 -0.071
8 C08 C C8 N Y N 0 -2.621 -0.265 -0.186
9 C09 C C9 N Y N 0 -2.976 -1.664 -0.416
10 C12 C C10 N Y N 0 -3.836 0.434 -0.066
11 C14 C C11 N Y N 0 -2.646 2.377 0.252
12 C16 C C12 N N N 0 -0.091 -1.291 0.79
13 N06 N N1 N N N 0 -0.198 -0.192 -0.181
14 N11 N N2 N Y N 0 -4.843 -0.48 -0.214
15 N13 N N3 N Y N 0 -3.796 1.748 0.151
16 N15 N N4 N Y N 0 -1.482 1.76 0.147
17 O01 O O1 N N N 0 5.865 0.945 -0.12
18 O18 O O2 N N N 0 2.313 -1.066 0.724
19 O19 O O3 N N N 0 4.703 -0.861 -0.641
20 H101 H H1 N N N 0 -4.895 -2.63 -0.565
21 H171 H H2 N N N 0 1.355 -2.788 1.349
22 H172 H H3 N N N 0 1.275 -2.459 -0.399
23 H031 H H4 N N N 0 3.395 1.3 1.081
24 H032 H H5 N N N 0 3.294 1.852 -0.608
25 H041 H H6 N N N 0 2.299 -0.372 -1.224
26 H051 H H7 N N N 0 0.877 1.192 0.979
27 H052 H H8 N N N 0 0.828 1.548 -0.764
28 H091 H H9 N N N 0 -2.291 -2.488 -0.556
29 H141 H H10 N N N 0 -2.652 3.443 0.427
30 H161 H H11 N N N 0 -0.909 -1.994 0.636
31 H162 H H12 N N N 0 -0.143 -0.888 1.802
32 H111 H H13 N N N 0 -5.79 -0.274 -0.177
33 H1 H H14 N N N 0 6.675 0.458 -0.327