Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WUD

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C1 N N N 0 -8.313 -5.586 1.83
2 O O O1 N N N 0 -5.68 -4.328 2.322
3 C1 C C2 N N N 0 -7.926 -5.004 0.489
4 C10 C C3 R N N 0 -3.777 -0.749 3.262
5 C11 C C4 N N N 0 -4.066 0.482 4.087
6 C12 C C5 N N N 0 -4.655 1.627 3.669
7 C13 C C6 S N N 0 -5.13 1.71 2.249
8 C14 C C7 N N N 0 -3.932 1.372 1.42
9 C15 C C8 R N N 0 -5.777 2.986 1.711
10 C16 C C9 R N N 0 -6.375 2.542 0.357
11 C17 C C10 N N N 0 -7.294 2.969 1.512
12 C18 C C11 N N N 0 -8.024 1.913 2.351
13 C19 C C12 N N N 0 -7.95 4.331 1.351
14 C2 C C13 N N N 0 -6.802 -4.293 0.231
15 C20 C C14 N N N 0 -6.465 1.019 0.104
16 C21 C C15 R N N 0 -5.185 0.242 -0.302
17 C22 C C16 N N N 0 -4.527 0.891 -1.522
18 C23 C C17 N N N 0 -3.591 0.412 5.527
19 C24 C C18 N N N 0 -1.756 -2.845 0.02
20 C3 C C19 N N N 0 -6.545 -3.767 -1.142
21 C4 C C20 N N N 0 -5.762 -3.929 1.169
22 C5 C C21 S N N 0 -3.899 -2.314 1.42
23 C6 C C22 N N N 0 -2.802 -1.874 0.508
24 C7 C C23 N N N 0 -2.866 -0.572 0.193
25 C8 C C24 S N N 0 -4.117 0.032 0.801
26 C9 C C25 S N N 0 -4.467 -0.986 1.905
27 O1 O O2 N N N 0 -4.823 -2.987 0.593
28 O2 O O3 N N N 0 -2.944 2.108 1.3
29 O3 O O4 N N N 0 -2.181 0.181 5.556
30 O4 O O5 N N N 0 -4.161 -1.854 4.073
31 O5 O O6 N N N 0 -5.868 -1.217 2.094
32 H1 H H1 N N N 0 -9.276 -6.111 1.739
33 H2 H H2 N N N 0 -7.539 -6.295 2.159
34 H3 H H3 N N N 0 -8.406 -4.776 2.568
35 H4 H H4 N N N 0 -8.605 -5.169 -0.335
36 H8 H H8 N N N 0 -5.243 3.945 1.781
37 H5 H H5 N N N 0 -2.691 -0.792 3.092
38 H6 H H6 N N N 0 -4.78 2.462 4.343
39 H7 H H7 N N N 0 -5.861 0.9 2.106
40 H9 H H9 N N N 0 -6.269 3.212 -0.509
41 H10 H H10 N N N 0 -8.629 2.411 3.123
42 H11 H H11 N N N 0 -8.68 1.317 1.7
43 H12 H H12 N N N 0 -7.287 1.253 2.832
44 H13 H H13 N N N 0 -8.583 4.54 2.226
45 H14 H H14 N N N 0 -7.173 5.105 1.268
46 H15 H H15 N N N 0 -8.569 4.334 0.442
47 H16 H H16 N N N 0 -7.2 0.87 -0.701
48 H17 H H17 N N N 0 -6.838 0.561 1.032
49 H18 H H18 N N N 0 -5.514 -0.76 -0.615
50 H19 H H19 N N N 0 -3.623 0.327 -1.795
51 H20 H H20 N N N 0 -5.232 0.883 -2.366
52 H21 H H21 N N N 0 -4.253 1.929 -1.282
53 H22 H H22 N N N 0 -3.817 1.362 6.034
54 H23 H H23 N N N 0 -4.107 -0.411 6.043
55 H24 H H24 N N N 0 -1.955 -3.842 0.441
56 H25 H H25 N N N 0 -1.789 -2.898 -1.078
57 H26 H H26 N N N 0 -0.761 -2.504 0.341
58 H27 H H27 N N N 0 -5.59 -3.221 -1.153
59 H28 H H28 N N N 0 -6.496 -4.605 -1.852
60 H29 H H29 N N N 0 -7.36 -3.087 -1.433
61 H30 H H30 N N N 0 -3.526 -2.927 2.254
62 H32 H H32 N N N 0 -2.14 -0.037 -0.401
63 H34 H H34 N N N 0 -1.885 0.137 6.458
64 H35 H H35 N N N 0 -3.766 -1.769 4.933
65 H36 H H36 N N N 0 -5.994 -1.853 2.788