Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WCV

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C23 C C1 N Y N 0 4.126 -2.881 0.378
2 C25 C C2 N Y N 0 -1.389 -0.572 0.419
3 C26 C C3 N Y N 0 -2.105 0.618 0.427
4 C10 C C4 N Y N 0 -1.496 1.794 0.837
5 C02 C C5 N N N 0 -3.953 -0.456 -0.638
6 C03 C C6 N N N 0 -5.425 -0.511 -0.958
7 C04 C C7 N N N 0 -6.271 -1.547 -0.215
8 C05 C C8 N N N 0 -5.942 -1.748 -1.696
9 C07 C C9 N N N 0 -4.283 1.783 0.293
10 C08 C C10 N N N 0 -3.467 3.036 -0.052
11 C09 C C11 N N N 0 -2.247 3.1 0.866
12 C11 C C12 N Y N 0 -0.169 1.777 1.235
13 C12 C C13 N Y N 0 0.547 0.598 1.227
14 C13 C C14 N Y N 0 -0.061 -0.584 0.82
15 C15 C C15 N Y N 0 2.02 -1.77 0.543
16 C17 C C16 N Y N 0 3.922 -0.633 -0.09
17 C19 C C17 N N N 0 5.958 0.592 -0.758
18 C20 C C18 N N N 0 6.347 1.959 -1.141
19 C21 C C19 N N N 0 6.657 3.049 -1.447
20 C24 C C20 N Y N 0 2.775 -2.94 0.657
21 N06 N N1 N N N 0 -3.444 0.61 0.01
22 N14 N N2 N N N 0 0.661 -1.781 0.819
23 N16 N N3 N Y N 0 2.624 -0.646 0.173
24 N18 N N4 N N N 0 4.521 0.555 -0.473
25 N22 N N5 N Y N 0 4.664 -1.726 0.014
26 O01 O O1 N N N 0 -3.227 -1.371 -0.965
27 H1 H H1 N N N 0 4.739 -3.766 0.46
28 H2 H H2 N N N 0 -1.867 -1.488 0.106
29 H3 H H3 N N N 0 -5.891 0.446 -1.192
30 H4 H H4 N N N 0 -5.763 -2.188 0.505
31 H5 H H5 N N N 0 -7.294 -1.271 0.04
32 H6 H H6 N N N 0 -6.748 -1.604 -2.414
33 H7 H H7 N N N 0 -5.217 -2.522 -1.95
34 H8 H H8 N N N 0 -4.553 1.798 1.349
35 H9 H H9 N N N 0 -5.184 1.748 -0.319
36 H10 H H10 N N N 0 -3.141 2.985 -1.09
37 H11 H H11 N N N 0 -4.082 3.924 0.096
38 H12 H H12 N N N 0 -2.574 3.304 1.886
39 H13 H H13 N N N 0 -1.588 3.901 0.533
40 H14 H H14 N N N 0 0.308 2.693 1.552
41 H15 H H15 N N N 0 1.581 0.593 1.538
42 H16 H H16 N N N 0 6.184 -0.093 -1.575
43 H17 H H17 N N N 0 6.512 0.292 0.131
44 H18 H H18 N N N 0 6.934 4.024 -1.72
45 H19 H H19 N N N 0 2.312 -3.869 0.955
46 H20 H H20 N N N 0 0.212 -2.618 1.011
47 H21 H H21 N N N 0 3.99 1.362 -0.553