Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : W1B

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -4.629 0.268 -0.138
2 C5 C C2 N N N 0 -2.469 -0.466 -0.712
3 C6 C C3 N N N 0 0.503 -0.438 0.399
4 N1 N N1 N N N 0 -3.777 -0.338 -0.978
5 N3 N N2 N N N 0 5.828 1.166 -0.506
6 C2 C C4 N N N 0 -2.694 1.265 1.041
7 C1 C C5 S N N 0 -1.876 0.058 0.569
8 C3 C C6 N N N 0 -4.16 0.84 1.174
9 O1 O O1 N N N 0 -1.749 -1.016 -1.518
10 O2 O O2 N N N 0 -5.799 0.36 -0.442
11 N2 N N3 N N N 0 -0.49 0.471 0.335
12 C7 C C7 N Y N 0 1.896 -0.023 0.163
13 O3 O O3 N N N 0 0.249 -1.6 0.651
14 C8 C C8 N Y N 0 2.191 1.313 -0.128
15 C9 C C9 N Y N 0 3.482 1.697 -0.346
16 C10 C C10 N Y N 0 4.516 0.764 -0.282
17 C11 C C11 N Y N 0 4.239 -0.567 0.006
18 C12 C C12 N Y N 0 2.934 -0.966 0.235
19 O4 O O4 N N N 0 2.657 -2.264 0.516
20 H6 H H1 N N N 0 -4.121 -0.696 -1.812
21 H12 H H2 N N N 0 6.023 2.095 -0.708
22 H13 H H3 N N N 0 6.548 0.518 -0.462
23 H3 H H4 N N N 0 -2.322 1.604 2.008
24 H2 H H5 N N N 0 -2.612 2.073 0.314
25 H1 H H6 N N N 0 -1.901 -0.723 1.329
26 H5 H H7 N N N 0 -4.769 1.706 1.432
27 H4 H H8 N N N 0 -4.25 0.084 1.954
28 H7 H H9 N N N 0 -0.287 1.398 0.133
29 H8 H H10 N N N 0 1.396 2.042 -0.18
30 H9 H H11 N N N 0 3.705 2.73 -0.571
31 H10 H H12 N N N 0 5.042 -1.288 0.055
32 H11 H H13 N N N 0 2.677 -2.475 1.46