Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : W13

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C4 N Y N 0 4.135 1.297 0.467
2 C5 C C5 N Y N 0 3.655 0.029 0.169
3 C11 C C11 N N N 0 8.101 -0.199 -0.971
4 C7 C C7 N N N 0 5.983 -0.825 0.192
5 C8 C C8 N N N 0 6.655 -2.14 0.601
6 C9 C C9 N N N 0 8.167 -1.923 0.695
7 C12 C C12 N N N 0 6.585 -0.346 -1.132
8 C13 C C13 N Y N 0 2.289 -0.174 0.011
9 C3 C C3 N Y N 0 3.255 2.352 0.613
10 CL1 CL CL1 N N N 0 0.792 3.474 0.644
11 C2 C C2 N Y N 0 1.895 2.146 0.461
12 N6 N N6 N N N 0 4.543 -1.041 0.026
13 O10 O O10 N N N 0 8.658 -1.449 -0.561
14 CL14 CL CL14 N N N 0 1.684 -1.758 -0.362
15 C15 C C15 N Y N 0 1.414 0.886 0.152
16 C16 C C16 R N N 0 -0.068 0.666 -0.013
17 C17 C C17 N N N 0 -0.79 1.041 1.286
18 C18 C C18 N N N 0 -2.276 0.895 1.082
19 C19 C C19 N N N 0 -2.843 1.07 -0.194
20 S20 S S20 N N N 0 -4.583 0.885 -0.395
21 C21 C C21 N Y N 0 -4.842 -0.825 -0.058
22 C22 C C22 N Y N 0 -6.134 -1.336 0.006
23 CL23 CL CL23 N N N 0 -7.496 -0.289 -0.247
24 C24 C C24 N Y N 0 -6.332 -2.677 0.27
25 C25 C C25 N Y N 0 -5.247 -3.512 0.471
26 C26 C C26 N Y N 0 -3.961 -3.007 0.409
27 C27 C C27 N Y N 0 -3.755 -1.668 0.14
28 C28 C C28 N N N 0 -2.086 1.376 -1.267
29 O29 O O29 N N N 0 -2.674 1.53 -2.472
30 C30 C C30 N N N 0 -0.595 1.55 -1.146
31 O31 O O31 N N N 0 -2.99 0.624 2.027
32 H1 H H1 N N N 0 5.196 1.458 0.59
33 H2 H H2 N N N 0 8.54 0.101 -1.922
34 H3 H H3 N N N 0 8.314 0.559 -0.217
35 H4 H H4 N N N 0 6.152 -0.073 0.963
36 H5 H H5 N N N 0 6.271 -2.459 1.57
37 H6 H H6 N N N 0 6.441 -2.905 -0.146
38 H7 H H7 N N N 0 8.382 -1.188 1.47
39 H8 H H8 N N N 0 8.655 -2.866 0.943
40 H9 H H9 N N N 0 6.152 0.617 -1.402
41 H10 H H10 N N N 0 6.371 -1.075 -1.914
42 H11 H H11 N N N 0 3.629 3.338 0.845
43 H12 H H12 N N N 0 4.207 -1.926 -0.182
44 H13 H H13 N N N 0 -0.257 -0.382 -0.248
45 H14 H H14 N N N 0 -0.465 0.378 2.088
46 H15 H H15 N N N 0 -0.557 2.073 1.547
47 H16 H H16 N N N 0 -7.335 -3.075 0.32
48 H17 H H17 N N N 0 -5.405 -4.56 0.678
49 H18 H H18 N N N 0 -3.117 -3.662 0.567
50 H19 H H19 N N N 0 -2.75 -1.276 0.087
51 H20 H H20 N N N 0 -3.64 1.482 -2.446
52 H21 H H21 N N N 0 -0.368 2.593 -0.928
53 H22 H H22 N N N 0 -0.118 1.262 -2.083