Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VLT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 28


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 -0.644 1.262 -0.618
2 CA C CA S N N 0 -0.748 -0.193 -0.437
3 C2 C C2 N N N 0 -2.186 -0.565 -0.182
4 C3 C C3 N N N 0 0.109 -0.621 0.756
5 C4 C C4 N Y N 0 1.562 -0.36 0.45
6 C5 C C5 N Y N 0 2.128 0.859 0.775
7 C6 C C6 N Y N 0 2.327 -1.342 -0.151
8 C7 C C7 N Y N 0 3.459 1.1 0.496
9 C8 C C8 N Y N 0 3.659 -1.106 -0.433
10 C9 C C9 N Y N 0 4.228 0.118 -0.112
11 O1 O O1 N N N 0 5.537 0.354 -0.389
12 C10 C C10 N N N 0 -3.136 0.364 -0.249
13 C C C N N N 0 -4.538 0.0 0.0
14 O O O N N N 0 -4.83 -1.149 0.267
15 OXT O OXT N N Y 0 -5.501 0.942 -0.068
16 H H H N N N 0 -1.15 1.561 -1.438
17 HA H H1 N N N 0 -0.396 -0.697 -1.337
18 H3 H H3 N N N 0 -2.445 -1.587 0.056
19 H4 H H4 N N N 0 -0.184 -0.051 1.637
20 H5 H H5 N N N 0 -0.037 -1.684 0.945
21 H6 H H6 N N N 0 1.528 1.622 1.249
22 H7 H H7 N N N 0 1.884 -2.295 -0.401
23 H8 H H8 N N N 0 3.9 2.052 0.75
24 H9 H H9 N N N 0 4.257 -1.873 -0.901
25 H10 H H10 N N N 0 6.141 0.106 0.325
26 H11 H H11 N N N 0 -2.877 1.385 -0.486
27 HXT H HXT N N Y 0 -6.408 0.655 0.103
28 H2 H H2 N N Y 0 -0.964 1.752 0.204