Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VJG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 38


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C12 C C1 N Y N 0 0.457 0.038 0.591
2 C13 C C2 N Y N 0 1.311 -0.629 1.477
3 C14 C C3 N Y N 0 2.655 -0.695 1.213
4 C15 C C4 N Y N 0 0.976 0.635 -0.564
5 C16 C C5 N Y N 0 2.32 0.566 -0.825
6 C17 C C6 N Y N 0 3.171 -0.099 0.06
7 C18 C C7 N Y N 0 4.621 -0.171 -0.223
8 C02 C C8 N N N 0 -0.986 0.105 0.869
9 C03 C C9 R N N 0 -1.905 0.823 -0.085
10 C04 C C10 N N N 0 -1.966 2.327 0.252
11 C05 C C11 N N N 0 -3.42 2.771 0.018
12 C06 C C12 N N N 0 -4.193 1.521 -0.452
13 C07 C C13 S N N 0 -3.363 0.333 0.096
14 C08 C C14 N N N 0 -3.617 -0.931 -0.728
15 C09 C C15 N N N 0 -5.044 -1.378 -0.535
16 N19 N N1 N Y N 0 5.567 -0.776 0.535
17 N20 N N2 N Y N 0 6.696 -0.609 -0.065
18 N21 N N3 N Y N 0 6.503 0.062 -1.146
19 N22 N N4 N Y N 0 5.25 0.336 -1.267
20 O01 O O1 N N N 0 -1.436 -0.417 1.867
21 O10 O O2 N N N 0 -5.781 -0.749 0.187
22 O11 O O3 N N N 0 -5.494 -2.474 -1.165
23 H1 H H1 N N N 0 0.912 -1.089 2.368
24 H2 H H2 N N N 0 3.314 -1.209 1.896
25 H3 H H3 N N N 0 0.318 1.149 -1.249
26 H4 H H4 N N N 0 2.721 1.026 -1.716
27 H5 H H5 N N N 0 -1.576 0.675 -1.114
28 H6 H H6 N N N 0 -1.689 2.488 1.294
29 H7 H H7 N N N 0 -1.295 2.884 -0.403
30 H8 H H8 N N N 0 -3.849 3.147 0.947
31 H9 H H9 N N N 0 -3.456 3.544 -0.749
32 H10 H H10 N N N 0 -5.197 1.512 -0.03
33 H11 H H11 N N N 0 -4.237 1.488 -1.541
34 H12 H H12 N N N 0 -3.588 0.159 1.148
35 H13 H H13 N N N 0 -3.442 -0.719 -1.782
36 H14 H H14 N N N 0 -2.942 -1.72 -0.399
37 H15 H H15 N N N 0 5.422 -1.246 1.371
38 H16 H H16 N N N 0 -6.416 -2.721 -1.01