Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VE0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 1.07 0.035 0.028
2 C7 C C1 N N N 0 3.837 -0.783 -0.078
3 C8 C C2 N N N 0 2.87 -1.043 -1.236
4 N2 N N2 N N N 0 -2.859 -1.502 -0.038
5 C9 C C3 N N N 0 1.794 0.045 -1.25
6 C1 C C4 N Y N 0 -2.371 1.337 0.003
7 C5 C C5 N N N 0 1.969 0.33 1.15
8 C6 C C6 N N N 0 3.051 -0.749 1.236
9 N3 N N3 N N N 0 -0.578 -1.861 0.215
10 C4 C C7 N Y N 0 -0.755 3.098 -0.056
11 C3 C C8 N Y N 0 0.004 0.919 0.001
12 C2 C C9 N Y N 0 -1.311 0.427 0.024
13 O O O1 N N N 0 -3.106 -2.895 0.006
14 C10 C C10 N N N 0 -1.569 -1.027 0.071
15 N N N4 N Y N 0 0.231 2.222 -0.03
16 C C C11 N Y N 0 -2.076 2.69 -0.04
17 H1 H H1 N N N 0 4.581 -1.579 -0.037
18 H2 H H2 N N N 0 4.337 0.175 -0.227
19 H3 H H3 N N N 0 3.418 -1.025 -2.178
20 H4 H H4 N N N 0 2.401 -2.018 -1.106
21 H5 H H5 N N N 0 -3.597 -0.882 -0.146
22 H6 H H6 N N N 0 1.096 -0.146 -2.065
23 H7 H H7 N N N 0 2.263 1.018 -1.394
24 H8 H H8 N N N 0 -3.395 0.994 0.015
25 H9 H H9 N N N 0 2.438 1.302 0.995
26 H10 H H10 N N N 0 1.398 0.346 2.079
27 H11 H H11 N N N 0 2.584 -1.72 1.405
28 H12 H H12 N N N 0 3.728 -0.522 2.059
29 H13 H H13 N N N 0 0.316 -1.527 0.39
30 H14 H H14 N N N 0 -0.527 4.153 -0.089
31 H15 H H15 N N N 0 -4.04 -3.132 -0.078
32 H16 H H16 N N N 0 -2.872 3.42 -0.062