Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : UX5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -3.133 -0.364 0.217
2 N3 N N2 N N N 0 -3.976 -1.382 0.681
3 C4 C C1 N N N 0 -1.968 1.687 -1.146
4 C5 C C2 N N N 0 -4.917 -0.466 -1.114
5 C6 C C3 N N N 0 -5.053 -1.442 -0.125
6 C7 C C4 N N N 0 -1.33 1.135 -0.012
7 C8 C C5 N N N 0 -0.029 1.657 0.444
8 C10 C C6 N Y N 0 3.484 0.518 0.263
9 C13 C C7 N Y N 0 4.118 0.655 -0.958
10 C15 C C8 N Y N 0 5.491 -1.247 -0.456
11 C1 C C9 N N N 0 -1.298 -0.519 1.878
12 C11 C C10 N Y N 0 3.855 -0.495 1.128
13 C12 C C11 N Y N 0 4.856 -1.378 0.772
14 C14 C C12 N Y N 0 5.12 -0.224 -1.321
15 C2 C C13 N N N 0 -1.946 0.093 0.663
16 C3 C C14 N N N 0 -3.72 0.204 -0.888
17 C9 C C15 N N N 0 2.392 1.479 0.655
18 N2 N N3 N N N 0 -3.125 1.212 -1.541
19 N4 N N4 N N N 0 1.099 0.96 0.203
20 N5 N N5 N N N 0 6.503 -2.137 -0.82
21 O1 O O1 N N N 0 -5.989 -2.217 -0.01
22 O2 O O2 N N N 0 0.027 2.717 1.038
23 H6 H H1 N N N 0 -3.811 -1.949 1.451
24 H4 H H2 N N N 0 -1.504 2.5 -1.686
25 H16 H H3 N N N 0 -5.618 -0.264 -1.91
26 H12 H H5 N N N 0 3.829 1.449 -1.63
27 H2 H H6 N N N 0 -0.4 0.044 2.134
28 H3 H H7 N N N 0 -1.996 -0.49 2.715
29 H1 H H8 N N N 0 -1.03 -1.554 1.665
30 H10 H H9 N N N 0 3.361 -0.597 2.083
31 H11 H H10 N N N 0 5.142 -2.172 1.446
32 H13 H H11 N N N 0 5.611 -0.12 -2.277
33 H9 H H12 N N N 0 2.379 1.592 1.74
34 H8 H H13 N N N 0 2.577 2.448 0.192
35 H7 H H14 N N N 0 1.055 0.115 -0.271
36 H15 H H15 N N N 0 6.764 -2.849 -0.214
37 H14 H H16 N N N 0 6.946 -2.045 -1.678