Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : TVF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 70


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 2.553 -0.677 -1.057
2 C4 C C1 N Y N 0 4.422 2.991 -0.268
3 C5 C C2 N Y N 0 3.734 1.817 -0.544
4 C6 C C3 N Y N 0 3.069 1.161 0.468
5 C7 C C4 N N N 0 3.781 1.312 -1.965
6 C8 C C5 N N N 0 2.701 0.256 -2.184
7 C10 C C6 N N N 0 1.449 0.643 -2.964
8 C13 C C7 N Y N 0 2.639 -2.904 -0.043
9 C15 C C8 N Y N 0 1.483 -3.732 1.893
10 C17 C C9 N Y N 0 3.644 -4.605 1.322
11 C20 C C10 N Y N 0 0.251 1.167 -0.573
12 C21 C C11 N Y N 0 -1.092 1.485 -0.514
13 C22 C C12 N Y N 0 -1.902 0.895 0.446
14 C24 C C13 N Y N 0 -0.018 -0.336 1.274
15 C26 C C14 N N N 0 -5.449 1.032 1.433
16 C28 C C15 N N N 0 -7.287 -1.126 -0.947
17 C1 C C16 N Y N 0 3.118 1.668 1.762
18 C11 C C17 N N N 0 2.489 -0.287 -3.594
19 C12 C C18 N N N 0 2.691 -2.008 -1.218
20 C14 C C19 N Y N 0 1.525 -2.894 0.798
21 C16 C C20 N Y N 0 2.542 -4.582 2.158
22 C18 C C21 N Y N 0 3.702 -3.768 0.228
23 C19 C C22 N Y N 0 0.788 0.258 0.32
24 C2 C C23 N Y N 0 3.807 2.828 2.04
25 C23 C C24 N Y N 0 -1.36 -0.013 1.344
26 C25 C C25 N N N 0 -3.996 0.56 1.52
27 C27 C C26 N N N 0 -6.223 -0.883 0.144
28 C29 C C27 R N N 0 -8.062 0.203 -1.054
29 C3 C C28 N Y N 0 4.462 3.5 1.018
30 C30 C C29 N N N 0 -7.401 1.138 -0.018
31 C31 C C30 N N N 0 -9.538 -0.013 -0.709
32 C9 C C31 R N N 0 2.253 -0.087 0.253
33 N2 N N2 N N N 0 -6.031 0.59 0.159
34 O1 O O1 N N N 0 2.859 -2.472 -2.329
35 O2 O O2 N N N 0 5.138 4.65 1.279
36 O3 O O3 N N N 0 -3.223 1.206 0.507
37 H1 H H1 N N N 0 4.932 3.512 -1.065
38 H2 H H2 N N N 0 3.617 2.144 -2.649
39 H3 H H3 N N N 0 4.76 0.873 -2.16
40 H4 H H4 N N N 0 0.503 0.202 -2.65
41 H5 H H5 N N N 0 1.389 1.663 -3.345
42 H6 H H6 N N N 0 0.621 -3.725 2.544
43 H7 H H7 N N N 0 4.468 -5.271 1.535
44 H8 H H8 N N N 0 0.881 1.626 -1.32
45 H9 H H9 N N N 0 -1.512 2.192 -1.214
46 H10 H H10 N N N 0 0.404 -1.043 1.973
47 H11 H H11 N N N 0 -6.019 0.609 2.26
48 H12 H H12 N N N 0 -5.481 2.12 1.489
49 H13 H H13 N N N 0 -6.808 -1.363 -1.897
50 H14 H H14 N N N 0 -7.958 -1.933 -0.651
51 H15 H H15 N N N 0 2.609 1.146 2.559
52 H16 H H16 N N N 0 3.113 0.12 -4.39
53 H17 H H17 N N N 0 2.227 -1.34 -3.694
54 H18 H H18 N N N 0 0.698 -2.231 0.592
55 H19 H H19 N N N 0 2.502 -5.24 3.014
56 H20 H H20 N N N 0 4.567 -3.781 -0.419
57 H21 H H21 N N N 0 3.838 3.213 3.049
58 H22 H H22 N N N 0 -1.989 -0.477 2.09
59 H23 H H23 N N N 0 -3.591 0.81 2.501
60 H24 H H24 N N N 0 -3.956 -0.52 1.376
61 H25 H H25 N N N 0 -6.585 -1.229 1.112
62 H26 H H26 N N N 0 -5.291 -1.387 -0.115
63 H27 H H27 N N N 0 -7.965 0.618 -2.057
64 H28 H H28 N N N 0 -7.356 2.157 -0.4
65 H29 H H29 N N N 0 -7.949 1.109 0.924
66 H30 H H30 N N N 0 -9.62 -0.416 0.3
67 H31 H H31 N N N 0 -10.066 0.939 -0.764
68 H32 H H32 N N N 0 -9.977 -0.714 -1.418
69 H33 H H33 N N N 0 2.486 -0.81 1.035
70 H35 H H35 N N N 0 4.602 5.45 1.191