Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : TO9

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 24


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O3 O O1 N N N 0 -3.797 -1.502 -0.229
2 C2 C C1 N N N 0 -3.431 -0.263 0.134
3 O2 O O2 N N N 0 -4.262 0.608 0.236
4 C1 C C2 R N N 0 -1.982 0.042 0.415
5 O1 O O3 N N N 0 -1.861 1.384 0.892
6 C3 C C3 N N N 0 -1.168 -0.117 -0.871
7 C4 C C4 N Y N 0 0.296 0.067 -0.565
8 C9 C C5 N Y N 0 0.86 1.327 -0.632
9 C8 C C6 N Y N 0 2.204 1.502 -0.353
10 C7 C C7 N Y N 0 2.986 0.412 -0.006
11 O5 O O4 N N N 0 4.307 0.582 0.269
12 C6 C C8 N Y N 0 2.417 -0.856 0.062
13 O4 O O5 N N N 0 3.181 -1.929 0.402
14 C5 C C9 N Y N 0 1.07 -1.023 -0.214
15 H1 H H1 N N N 0 -4.738 -1.649 -0.398
16 H2 H H2 N N N 0 -1.605 -0.647 1.171
17 H3 H H3 N N N 0 -2.178 2.053 0.269
18 H4 H H4 N N N 0 -1.331 -1.113 -1.282
19 H5 H H5 N N N 0 -1.485 0.632 -1.597
20 H6 H H6 N N N 0 0.251 2.177 -0.902
21 H7 H H7 N N N 0 2.642 2.487 -0.406
22 H8 H H8 N N N 0 4.495 0.763 1.201
23 H9 H H9 N N N 0 3.208 -2.106 1.352
24 H10 H H10 N N N 0 0.625 -2.006 -0.159