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PDBeChem : Atoms of Molecule
Molecule : SAH
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 46
| Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
| 1 |
N |
N |
N |
N |
N |
N |
0 |
0.663 |
0.742 |
6.843 |
| 2 |
CA |
C |
CA |
S |
N |
N |
0 |
-0.668 |
0.558 |
6.251 |
| 3 |
CB |
C |
CB |
N |
N |
N |
0 |
-0.553 |
-0.315 |
5.0 |
| 4 |
CG |
C |
CG |
N |
N |
N |
0 |
0.365 |
0.365 |
3.985 |
| 5 |
SD |
S |
SD |
N |
N |
N |
0 |
0.501 |
-0.669 |
2.501 |
| 6 |
C |
C |
C |
N |
N |
N |
0 |
-1.573 |
-0.112 |
7.251 |
| 7 |
O |
O |
O |
N |
N |
N |
0 |
-1.112 |
-0.872 |
8.07 |
| 8 |
OXT |
O |
OXT |
N |
N |
Y |
0 |
-2.893 |
0.132 |
7.232 |
| 9 |
C5' |
C |
C5* |
N |
N |
N |
0 |
1.616 |
0.354 |
1.503 |
| 10 |
C4' |
C |
C4* |
S |
N |
N |
0 |
1.883 |
-0.337 |
0.164 |
| 11 |
O4' |
O |
O4* |
N |
N |
N |
0 |
0.652 |
-0.486 |
-0.561 |
| 12 |
C3' |
C |
C3* |
S |
N |
N |
0 |
2.824 |
0.529 |
-0.694 |
| 13 |
O3' |
O |
O3* |
N |
N |
N |
0 |
4.026 |
-0.179 |
-1.001 |
| 14 |
C2' |
C |
C2* |
R |
N |
N |
0 |
2.009 |
0.8 |
-1.986 |
| 15 |
O2' |
O |
O2* |
N |
N |
N |
0 |
2.844 |
0.71 |
-3.143 |
| 16 |
C1' |
C |
C1* |
R |
N |
N |
0 |
0.97 |
-0.349 |
-1.963 |
| 17 |
N9 |
N |
N9 |
N |
Y |
N |
0 |
-0.223 |
0.014 |
-2.73 |
| 18 |
C8 |
C |
C8 |
N |
Y |
N |
0 |
-1.297 |
0.715 |
-2.267 |
| 19 |
N7 |
N |
N7 |
N |
Y |
N |
0 |
-2.176 |
0.859 |
-3.215 |
| 20 |
C5 |
C |
C5 |
N |
Y |
N |
0 |
-1.724 |
0.261 |
-4.344 |
| 21 |
C6 |
C |
C6 |
N |
Y |
N |
0 |
-2.228 |
0.098 |
-5.645 |
| 22 |
N6 |
N |
N6 |
N |
N |
N |
0 |
-3.462 |
0.617 |
-5.997 |
| 23 |
N1 |
N |
N1 |
N |
Y |
N |
0 |
-1.493 |
-0.566 |
-6.531 |
| 24 |
C2 |
C |
C2 |
N |
Y |
N |
0 |
-0.314 |
-1.065 |
-6.204 |
| 25 |
N3 |
N |
N3 |
N |
Y |
N |
0 |
0.196 |
-0.936 |
-4.998 |
| 26 |
C4 |
C |
C4 |
N |
Y |
N |
0 |
-0.463 |
-0.283 |
-4.048 |
| 27 |
HN1 |
H |
1HN |
N |
N |
N |
0 |
1.26 |
1.096 |
6.11 |
| 28 |
HN2 |
H |
2HN |
N |
N |
N |
0 |
1.006 |
-0.176 |
7.077 |
| 29 |
HA |
H |
HA |
N |
N |
N |
0 |
-1.082 |
1.528 |
5.979 |
| 30 |
HB1 |
H |
1HB |
N |
N |
N |
0 |
-0.139 |
-1.286 |
5.272 |
| 31 |
HB2 |
H |
2HB |
N |
N |
N |
0 |
-1.541 |
-0.452 |
4.561 |
| 32 |
HG1 |
H |
1HG |
N |
N |
N |
0 |
-0.048 |
1.336 |
3.713 |
| 33 |
HG2 |
H |
2HG |
N |
N |
N |
0 |
1.354 |
0.502 |
4.424 |
| 34 |
HXT |
H |
HXT |
N |
N |
Y |
0 |
-3.474 |
-0.297 |
7.874 |
| 35 |
H5'1 |
H |
1H5* |
N |
N |
N |
0 |
1.155 |
1.325 |
1.324 |
| 36 |
H5'2 |
H |
2H5* |
N |
N |
N |
0 |
2.557 |
0.491 |
2.035 |
| 37 |
H4' |
H |
H4* |
N |
N |
N |
0 |
2.333 |
-1.315 |
0.336 |
| 38 |
H3' |
H |
H3* |
N |
N |
N |
0 |
3.052 |
1.464 |
-0.184 |
| 39 |
H2' |
H |
H2* |
N |
N |
N |
0 |
1.516 |
1.771 |
-1.94 |
| 40 |
HO3' |
H |
*HO3 |
N |
N |
N |
0 |
4.544 |
0.389 |
-1.587 |
| 41 |
HO2' |
H |
*HO2 |
N |
N |
N |
0 |
3.465 |
1.449 |
-3.098 |
| 42 |
H1' |
H |
H1* |
N |
N |
N |
0 |
1.407 |
-1.269 |
-2.349 |
| 43 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-1.402 |
1.095 |
-1.262 |
| 44 |
HN61 |
H |
1HN6 |
N |
N |
N |
0 |
-3.799 |
0.498 |
-6.899 |
| 45 |
HN62 |
H |
2HN6 |
N |
N |
N |
0 |
-3.989 |
1.101 |
-5.343 |
| 46 |
H2 |
H |
H2 |
N |
N |
Y |
0 |
0.25 |
-1.598 |
-6.954 |
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