Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RFR

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 58


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 4.083 0.254 1.093
2 N3 N N2 N Y N 0 -0.563 3.428 -1.782
3 C4 C C1 S N N 0 1.816 -0.563 1.449
4 C5 C C2 N N N 0 1.159 0.547 0.671
5 C6 C C3 N Y N 0 -0.648 1.363 -0.643
6 C7 C C4 N Y N 0 0.053 2.422 -1.177
7 C8 C C5 N Y N 0 -1.868 3.487 -1.914
8 C10 C C6 N Y N 0 -4.077 2.49 -1.529
9 C13 C C7 N N N 0 -5.732 0.616 2.462
10 C15 C C8 N Y N 0 -2.057 1.365 -0.751
11 C17 C C9 N Y N 0 1.168 -2.531 0.074
12 C20 C C10 N Y N 0 3.759 -2.93 -0.782
13 C21 C C11 N Y N 0 3.473 -1.886 0.085
14 C22 C C12 N N N 0 4.603 -1.0 0.539
15 CL CL CL1 N N N 0 0.188 -4.626 -1.334
16 C18 C C13 N Y N 0 1.455 -3.572 -0.79
17 C19 C C14 N Y N 0 2.755 -3.77 -1.219
18 C2 C C15 N N N 0 5.17 1.085 1.626
19 C1 C C16 N N N 0 6.06 1.535 0.496
20 O O O1 N N N 0 5.812 1.196 -0.642
21 N N N3 N N N 0 7.13 2.313 0.749
22 C C C17 N N N 0 7.995 2.75 -0.349
23 C16 C C18 N Y N 0 2.176 -1.686 0.511
24 C3 C C19 N N N 0 3.076 -0.027 2.129
25 O1 O O2 N N N 0 1.655 1.654 0.655
26 N2 N N4 N N N 0 0.019 0.311 -0.009
27 C9 C C20 N Y N 0 -2.678 2.46 -1.406
28 C14 C C21 N Y N 0 -2.843 0.328 -0.237
29 C12 C C22 N Y N 0 -4.215 0.387 -0.375
30 C11 C C23 N Y N 0 -4.821 1.471 -1.022
31 N4 N N5 N N N 0 -5.005 -0.643 0.134
32 S S S1 N N N 0 -6.359 -0.288 1.02
33 O2 O O3 N N N 0 -6.866 -1.557 1.409
34 O3 O O4 N N N 0 -7.111 0.575 0.178
35 H2 H H2 N N N 0 1.125 -0.932 2.207
36 H3 H H3 N N N 0 1.13 2.433 -1.101
37 H4 H H4 N N N 0 -2.32 4.331 -2.416
38 H5 H H5 N N N 0 -4.56 3.319 -2.025
39 H6 H H6 N N N 0 -5.294 1.56 2.137
40 H7 H H7 N N N 0 -6.552 0.815 3.151
41 H8 H H8 N N N 0 -4.972 0.017 2.964
42 H9 H H9 N N N 0 0.154 -2.376 0.41
43 H10 H H10 N N N 0 4.773 -3.086 -1.118
44 H11 H H11 N N N 0 5.248 -0.777 -0.311
45 H12 H H12 N N N 0 5.182 -1.518 1.303
46 H13 H H13 N N N 0 2.983 -4.58 -1.896
47 H14 H H14 N N N 0 4.749 1.957 2.126
48 H15 H H15 N N N 0 5.755 0.504 2.34
49 H16 H H16 N N N 0 7.328 2.584 1.66
50 H17 H H17 N N N 0 8.801 3.367 0.047
51 H18 H H18 N N N 0 8.416 1.878 -0.849
52 H19 H H19 N N N 0 7.41 3.331 -1.063
53 H20 H H20 N N N 0 3.463 -0.772 2.823
54 H21 H H21 N N N 0 2.839 0.891 2.667
55 H22 H H22 N N N 0 -0.338 -0.59 -0.058
56 H23 H H23 N N N 0 -2.381 -0.511 0.263
57 H24 H H24 N N N 0 -5.896 1.499 -1.119
58 H25 H H25 N N N 0 -4.762 -1.568 -0.03