Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RBL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C2 N N N 0 2.05 0.842 0.484
2 C2 C C3 N N N 0 1.307 -0.38 0.011
3 C3 C C5 R N N 0 -0.078 -0.669 0.532
4 O3 O O13 N N N 0 -0.384 -2.05 0.331
5 C4 C C6 R N N 0 -1.095 0.193 -0.218
6 O4 O O14 N N N 0 -0.789 1.575 -0.017
7 C5 C C7 N N N 0 -2.5 -0.1 0.31
8 O5 O O8 N N N 0 -3.461 0.618 -0.467
9 O2 O O4 N N N 0 1.821 -1.128 -0.786
10 O1 O O1 N N N 0 3.331 0.896 -0.148
11 H11 H H2 N N N 0 1.481 1.736 0.228
12 H12 H H2A N N N 0 2.181 0.793 1.565
13 H3 H H5 N N N 0 -0.121 -0.438 1.596
14 HO3 H HO13 N N N 0 -0.364 -2.326 -0.596
15 H4 H H6 N N N 0 -1.052 -0.037 -1.283
16 HO4 H HO14 N N N 0 -0.808 1.851 0.909
17 H51 H H7 N N N 0 -2.7 -1.169 0.238
18 H52 H H7A N N N 0 -2.569 0.214 1.352
19 HO5 H HO8 N N N 0 -4.376 0.479 -0.188
20 HO1 H HO1 N N N 0 3.865 1.659 0.111