Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RBE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 3.313 0.129 0.775
2 C2 C C2 R N N 0 1.849 0.588 0.852
3 C3 C C3 S N N 0 0.965 -0.444 0.145
4 C4 C C4 N N N 0 1.476 -0.712 -1.275
5 C5 C C5 S N N 0 2.969 -1.073 -1.197
6 C6 C C6 N N N 0 3.138 -2.15 -0.102
7 C7 C C7 N N N 0 3.366 -1.357 1.202
8 C8 C C8 N N N 0 -1.427 -0.841 0.122
9 C9 C C9 N Y N 0 -2.82 -0.353 0.058
10 C10 C C10 N Y N 0 -3.882 -1.259 0.098
11 C11 C C11 N Y N 0 -5.181 -0.797 0.039
12 C12 C C12 N Y N 0 -5.432 0.561 -0.06
13 C13 C C13 N Y N 0 -4.384 1.463 -0.1
14 C14 C C14 N Y N 0 -3.08 1.015 -0.036
15 C15 C C15 N N N 0 1.703 1.926 0.173
16 N1 N N1 N N N 1 3.7 0.125 -0.661
17 O1 O O1 N N N 0 -0.404 0.035 0.083
18 O2 O O2 N N N 0 -1.203 -2.032 0.209
19 O3 O O3 N N N -1 2.635 2.713 0.17
20 O4 O O4 N N N 0 0.652 2.224 -0.368
21 H1 H H1 N N N 0 3.972 0.754 1.378
22 H2 H H2 N N N 0 1.547 0.674 1.896
23 H3 H H3 N N N 0 1.0 -1.367 0.723
24 H41 H 1H4 N N N 0 1.35 0.192 -1.871
25 H42 H 2H4 N N N 0 0.926 -1.533 -1.733
26 H5 H H5 N N N 0 3.363 -1.398 -2.16
27 H61 H 1H6 N N N 0 4.002 -2.779 -0.319
28 H62 H 2H6 N N N 0 2.236 -2.757 -0.024
29 H71 H 1H7 N N N 0 4.341 -1.595 1.625
30 H72 H 2H7 N N N 0 2.576 -1.573 1.92
31 H10 H H10 N N N 0 -3.688 -2.318 0.175
32 H11 H H11 N N N 0 -6.003 -1.496 0.07
33 H12 H H12 N N N 0 -6.45 0.917 -0.106
34 H13 H H13 N N N 0 -4.586 2.521 -0.179
35 H14 H H14 N N N 0 -2.263 1.721 -0.068
36 HN11 H 1HN1 N N N 0 3.39 0.967 -1.124
37 HN12 H 2HN1 N N N 0 4.696 0.009 -0.765