Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : R11

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 57


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -2.163 1.109 8.907
2 N2 N N2 N N N 0 -0.676 -0.608 9.392
3 C1 C C1 N N N 0 -1.264 0.258 8.497
4 C2 C C2 N Y N 0 -0.876 0.223 7.07
5 C3 C C3 N Y N 0 -1.471 1.1 6.162
6 C4 C C4 N Y N 0 -1.107 1.066 4.834
7 N N N N N N 0 0.217 0.125 3.054
8 C5 C C5 N Y N 0 -0.148 0.157 4.397
9 C6 C C6 N Y N 0 0.441 -0.721 5.3
10 C7 C C7 N Y N 0 0.085 -0.687 6.63
11 C C C N N N 0 1.227 -0.83 2.593
12 N3 N N3 N Y N 0 0.778 -1.295 0.187
13 C8 C C8 N Y N 0 1.439 -0.662 1.111
14 N9 N N9 N Y N 0 2.349 0.174 0.544
15 C3A C C3A N Y N 0 2.23 0.045 -0.824
16 C7A C C7A N Y N 0 1.219 -0.908 -1.037
17 C10 C C10 N Y N 0 2.877 0.619 -1.91
18 C11 C C11 N Y N 0 2.515 0.257 -3.19
19 C12 C C12 N Y N 0 1.513 -0.679 -3.399
20 C13 C C13 N Y N 0 0.869 -1.259 -2.343
21 C14 C C14 N N N 0 3.28 1.055 1.255
22 C9 C C9 N N N 0 1.131 -1.062 -4.806
23 N4 N N4 N Y N 0 0.067 -0.174 -5.281
24 C15 C C15 N Y N 0 0.233 1.006 -5.935
25 N16 N N16 N Y N 0 -0.924 1.532 -6.21
26 C17 C C17 N Y N 0 -1.913 0.724 -5.75
27 C18 C C18 N Y N 0 -1.291 -0.385 -5.153
28 C19 C C19 N Y N 0 -3.308 0.8 -5.773
29 C20 C C20 N Y N 0 -4.054 -0.197 -5.211
30 C21 C C21 N Y N 0 -3.44 -1.29 -4.617
31 C22 C C22 N Y N 0 -2.064 -1.386 -4.583
32 C23 C C23 N N N 0 1.565 1.616 -6.291
33 HN1 H HN1 N N N 0 -2.417 1.132 9.842
34 HN21 H 1HN2 N N N 0 -0.931 -0.585 10.328
35 HN22 H 2HN2 N N N 0 -0.008 -1.241 9.087
36 HC3 H HC3 N N N 0 -2.216 1.806 6.5
37 HC4 H HC4 N N N 0 -1.567 1.745 4.131
38 HC6 H HC6 N N N 0 1.186 -1.425 4.958
39 HC7 H HC7 N N N 0 0.547 -1.367 7.33
40 HN H HN N N N 0 -0.196 0.735 2.424
41 H1C H H1C N N N 0 0.887 -1.846 2.799
42 H2C H H2C N N N 0 2.165 -0.649 3.118
43 H10C H CH10 N N N 0 3.657 1.348 -1.752
44 H11C H CH11 N N N 0 3.014 0.705 -4.036
45 H13C H CH13 N N N 0 0.091 -1.987 -2.517
46 H141 H 1H14 N N N 0 4.211 0.521 1.445
47 H142 H 2H14 N N N 0 3.483 1.936 0.646
48 H143 H 3H14 N N N 0 2.837 1.362 2.202
49 HC91 H 1HC9 N N N 0 2.0 -0.967 -5.457
50 HC92 H 2HC9 N N N 0 0.778 -2.093 -4.819
51 H19C H CH19 N N N 0 -3.796 1.646 -6.233
52 H20C H CH20 N N N 0 -5.132 -0.135 -5.231
53 H21C H CH21 N N N 0 -4.043 -2.071 -4.177
54 H22C H CH22 N N N 0 -1.592 -2.239 -4.118
55 H231 H 1H23 N N N 0 1.873 1.266 -7.276
56 H232 H 2H23 N N N 0 1.475 2.702 -6.302
57 H233 H 3H23 N N N 0 2.308 1.32 -5.551