Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : QDC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 28


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C7 C C1 N N N 0 1.763 -0.232 0.555
2 C8 C C2 N N N 0 2.364 -1.477 -0.044
3 O1 O O1 N N N 0 -0.38 3.747 0.105
4 C1 C C3 N N N 0 -0.166 1.322 0.445
5 C5 C C4 N N N 0 -2.89 -2.021 0.221
6 C6 C C5 N N N 0 -4.24 -1.862 -0.482
7 C4 C C6 N N N 0 -1.914 -0.966 -0.306
8 O4 O O2 N N N 0 -0.815 1.372 1.463
9 C3 C C7 N N N 0 -0.564 -1.125 0.397
10 O3 O O3 N N N 0 1.794 -2.051 -0.942
11 C2 C C8 R N N 0 0.374 0.002 -0.041
12 C C C9 N N N 0 0.102 2.567 -0.329
13 O O O4 N N N 0 0.753 2.518 -1.351
14 O2 O O5 N N N 0 3.532 -1.949 0.419
15 H1 H H1 N N N 0 1.681 -0.352 1.635
16 H2 H H2 N N N 0 2.402 0.623 0.332
17 H3 H H3 N N N 0 -0.181 4.527 -0.431
18 H4 H H4 N N N 0 -3.022 -1.89 1.295
19 H5 H H5 N N N 0 -2.492 -3.016 0.022
20 H6 H H6 N N N 0 -4.935 -2.613 -0.107
21 H7 H H7 N N N 0 -4.638 -0.867 -0.283
22 H8 H H8 N N N 0 -4.109 -1.992 -1.556
23 H9 H H9 N N N 0 -1.783 -1.097 -1.38
24 H10 H H10 N N N 0 -2.313 0.029 -0.107
25 H11 H H11 N N N 0 -0.709 -1.079 1.476
26 H12 H H12 N N N 0 -0.127 -2.087 0.129
27 H13 H H13 N N N 0 0.442 0.016 -1.129
28 H14 H H14 N N N 0 3.878 -2.751 0.004