Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PNS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O23 O O23 N N N 0 3.289 -0.662 4.804
2 P24 P P24 N N N 0 2.094 0.159 4.105
3 O25 O O25 N N Y 0 2.606 0.763 2.703
4 O26 O O26 N N N 0 1.669 1.264 4.993
5 O27 O O27 N N N 0 0.848 -0.826 3.84
6 C28 C C28 N N N 0 -0.174 -0.042 3.222
7 C29 C C29 N N N 0 -1.393 -0.924 2.942
8 C30 C C30 N N N 0 -0.991 -2.068 2.009
9 C31 C C31 N N N 0 -1.918 -1.5 4.258
10 C32 C C32 R N N 0 -2.487 -0.085 2.28
11 O33 O O33 N N N 0 -2.958 0.898 3.203
12 C34 C C34 N N N 0 -1.927 0.598 1.059
13 O35 O O35 N N N 0 -1.748 1.798 1.065
14 N36 N N36 N N N 0 -1.624 -0.122 -0.037
15 C37 C C37 N N N 0 -1.156 0.552 -1.251
16 C38 C C38 N N N 0 -0.885 -0.487 -2.34
17 C39 C C39 N N N 0 -0.403 0.206 -3.588
18 O40 O O40 N N N 0 -0.287 1.413 -3.604
19 N41 N N41 N N N 0 -0.1 -0.515 -4.686
20 C42 C C42 N N N 0 0.367 0.159 -5.899
21 C43 C C43 N N N 0 0.638 -0.88 -6.988
22 S44 S S44 N N N 0 1.218 -0.045 -8.49
23 HOP1 H 1HOP N N N 0 4.013 -0.037 4.944
24 HOP2 H 2HOP N N Y 0 2.873 0.012 2.156
25 H282 H 2H28 N N N 0 0.2 0.367 2.284
26 H281 H 1H28 N N N 0 -0.459 0.772 3.887
27 H303 H 3H30 N N N 0 -0.504 -1.66 1.123
28 H302 H 2H30 N N N 0 -0.304 -2.736 2.527
29 H301 H 1H30 N N N 0 -1.881 -2.622 1.71
30 H313 H 3H31 N N N 0 -2.266 -0.688 4.897
31 H312 H 2H31 N N N 0 -2.744 -2.181 4.053
32 H311 H 1H31 N N N 0 -1.118 -2.041 4.763
33 H32 H H32 N N N 0 -3.313 -0.732 1.986
34 H33 H H33 N N N 0 -2.198 1.448 3.437
35 H36 H H36 N N N 0 -1.716 -1.087 -0.024
36 H372 H 2H37 N N N 0 -1.918 1.25 -1.596
37 H371 H 1H37 N N N 0 -0.237 1.096 -1.032
38 H382 H 2H38 N N N 0 -0.122 -1.185 -1.994
39 H381 H 1H38 N N N 0 -1.803 -1.032 -2.559
40 H41 H H41 N N N 0 -0.193 -1.48 -4.672
41 H422 H 2H42 N N N 0 -0.395 0.857 -6.244
42 H421 H 1H42 N N N 0 1.286 0.704 -5.68
43 H431 H 1H43 N N N 0 1.401 -1.578 -6.643
44 H432 H 2H43 N N N 0 -0.28 -1.425 -7.207
45 H44 H H44 N N N 0 1.392 -1.108 -9.296