Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PDC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 17


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 0.405 0.004 0.0
2 C2 C C2 N Y N 0 -0.24 0.0 1.155
3 C3 C C3 N Y N 0 -1.636 0.0 1.191
4 C4 C C4 N Y N 0 -2.344 0.0 0.0
5 C5 C C5 N Y N 0 -1.636 0.0 -1.191
6 C6 C C6 N Y N 0 -0.24 0.0 -1.155
7 C7 C C7 N N N 0 0.525 0.0 2.423
8 O1 O O1 N N N 0 -0.06 0.0 3.486
9 O2 O O2 N N Y 0 1.871 0.0 2.396
10 C8 C C8 N N N 0 0.525 0.0 -2.423
11 O3 O O3 N N N 0 -0.06 0.0 -3.486
12 O4 O O4 N N N 0 1.871 0.0 -2.396
13 H3 H H3 N N N 0 -2.158 -0.001 2.136
14 H4 H H4 N N N 0 -3.424 0.0 0.0
15 H5 H H5 N N N 0 -2.158 0.0 -2.136
16 HO2 H HO2 N N Y 0 2.371 0.0 3.224
17 HO4 H HO4 N N N 0 2.371 0.0 -3.224