Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PCV

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 28


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -0.754 0.815 -0.547
2 C8 C C8 N N N 0 -0.995 1.55 0.554
3 O1 O O1 N N N 0 -1.059 1.253 1.728
4 C9 C C9 N N N 0 -1.154 2.867 -0.159
5 C7 C C7 N N N 0 -0.884 2.003 -1.391
6 C1 C C1 S N N 0 -0.48 -0.602 -0.799
7 C2 C C2 R N N 0 0.796 -1.014 -0.063
8 C4 C C4 N N N 0 1.943 -0.088 -0.474
9 C5 C C5 N N N 0 3.245 -0.574 0.164
10 N2 N N2 N N N 0 4.346 0.314 -0.23
11 O3 O O3 N N N 0 0.586 -0.914 1.347
12 C3 C C3 N N N 0 -1.636 -1.433 -0.304
13 O2 O O2 N N N 0 -2.59 -0.897 0.207
14 O4 O O4 N N N 0 -1.605 -2.769 -0.43
15 HC91 H 1HC9 N N N 0 -0.375 3.597 0.059
16 HC92 H 2HC9 N N N 0 -2.161 3.282 -0.112
17 HC71 H 1HC7 N N N 0 0.042 2.267 -1.902
18 HC72 H 2HC7 N N N 0 -1.734 1.953 -2.072
19 HC1 H HC1 N N N 0 -0.35 -0.762 -1.869
20 H22 H 2H2 N N N 0 1.049 -2.042 -0.321
21 HC41 H 1HC4 N N N 0 1.73 0.926 -0.137
22 HC42 H 2HC4 N N N 0 2.045 -0.096 -1.559
23 HC51 H 1HC5 N N N 0 3.459 -1.589 -0.173
24 HC52 H 2HC5 N N N 0 3.143 -0.566 1.25
25 HN21 H 1HN2 N N N 0 4.158 1.213 0.189
26 HN22 H 2HN2 N N N 0 5.18 -0.043 0.211
27 HO3 H HO3 N N N 0 0.365 0.009 1.532
28 HO4 H HO4 N N N 0 -2.346 -3.303 -0.112