Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 P1 P P1 N N N 0 1.904 0.025 0.019
2 O1 O O1 N N N 0 2.503 -1.302 0.281
3 O3 O O3 N N N 0 1.872 0.296 -1.567
4 O4 O O4 N N N 0 2.786 1.164 0.74
5 O2 O O2 N N N 0 0.403 0.062 0.601
6 C1 C C1 N N N 0 -0.293 -1.039 0.014
7 C2 C C2 N N N 0 -1.734 -1.063 0.528
8 N1 N N1 N N N 1 -2.459 0.105 0.009
9 C3 C C3 N N N 0 -2.365 0.127 -1.457
10 C4 C C4 N N N 0 -1.865 1.332 0.556
11 C5 C C5 N N N 0 -3.87 0.023 0.408
12 HO3 H HO3 N N N 0 1.475 1.169 -1.694
13 HO4 H HO4 N N N 0 3.676 1.108 0.364
14 H11 H 1H1 N N N 0 0.204 -1.971 0.285
15 H12 H 2H1 N N N 0 -0.296 -0.931 -1.07
16 H21 H 1H2 N N N 0 -1.732 -1.034 1.618
17 H22 H 2H2 N N N 0 -2.226 -1.975 0.19
18 H31 H 1H3 N N N 0 -1.317 0.188 -1.753
19 H32 H 2H3 N N N 0 -2.805 -0.783 -1.863
20 H33 H 3H3 N N N 0 -2.902 0.994 -1.842
21 H41 H 1H4 N N N 0 -2.504 2.182 0.318
22 H42 H 2H4 N N N 0 -1.773 1.239 1.638
23 H43 H 3H4 N N N 0 -0.879 1.485 0.119
24 H51 H 1H5 N N N 0 -4.31 -0.888 0.001
25 H52 H 2H5 N N N 0 -3.94 0.006 1.495
26 H53 H 3H5 N N N 0 -4.407 0.89 0.022