Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PAU

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O2 N N N 0 2.889 2.0 1.445
2 C1 C C1 N N N 0 2.442 0.473 -0.374
3 C2 C C2 N N N 0 2.399 0.692 1.14
4 C3 C C3 N N N 0 1.568 1.52 -1.066
5 C4 C C4 N N N 0 3.884 0.606 -0.868
6 C5 C C5 R N N 0 1.918 -0.926 -0.702
7 O5' O O5' N N N 0 2.809 -1.907 -0.167
8 C6 C C6 N N N 0 0.551 -1.106 -0.093
9 O6' O O6' N N N 0 0.392 -1.885 0.823
10 N N N N N N 0 -0.496 -0.4 -0.567
11 C8 C C8 N N N 0 -1.803 -0.502 0.087
12 C9 C C9 N N N 0 -2.808 0.392 -0.642
13 C C C N N N 0 -4.153 0.288 0.029
14 OXT O OXT N N Y 0 -5.195 0.991 -0.442
15 O O O N N N 0 -4.293 -0.428 0.993
16 HO H HO N N N 0 2.891 2.208 2.39
17 H21 H H21 N N N 0 3.022 -0.054 1.633
18 H22 H H22 N N N 0 1.372 0.598 1.491
19 H31 H H31 N N N 0 2.006 2.509 -0.928
20 H32 H H32 N N N 0 1.507 1.296 -2.131
21 H33 H H33 N N N 0 0.568 1.503 -0.633
22 H41 H H41 N N N 0 4.495 -0.179 -0.421
23 H42 H H42 N N N 0 3.907 0.51 -1.953
24 H43 H H43 N N N 0 4.278 1.581 -0.581
25 H5 H H5 N N N 0 1.852 -1.046 -1.783
26 H5' H H5' N N N 0 2.916 -1.859 0.793
27 H H H N N N 0 -0.383 0.174 -1.34
28 H81 H H81 N N N 0 -2.146 -1.536 0.054
29 H82 H H82 N N N 0 -1.717 -0.18 1.125
30 H91 H H91 N N N 0 -2.465 1.426 -0.61
31 H92 H H92 N N N 0 -2.894 0.071 -1.68
32 HXT H HXT N N Y 0 -6.037 0.891 0.022