Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : P7S

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 62


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 3.019 -3.287 2.244
2 C13 C C2 N N N 0 3.462 -0.219 0.168
3 C17 C C3 N N N 0 4.87 3.162 -0.156
4 C21 C C4 N N N 0 5.981 1.184 -1.157
5 C24 C C5 N N N 0 -2.922 -1.498 0.27
6 C26 C C6 N Y N 0 -4.062 -0.562 0.304
7 C28 C C7 N Y N 0 -4.935 1.659 0.027
8 C01 C C8 N N N 0 -0.44 -1.612 -2.554
9 C02 C C9 N N N 0 -0.506 -2.67 -1.45
10 C03 C C10 N N N 0 -1.76 -3.525 -1.638
11 C04 C C11 N N N 0 0.735 -3.561 -1.522
12 C05 C C12 S N N 0 -0.56 -1.98 -0.085
13 C06 C C13 N N N 0 0.721 -1.219 0.144
14 C09 C C14 N N N 0 1.691 -3.109 1.478
15 C11 C C15 N N N 0 3.948 -2.233 1.586
16 C12 C C16 S N N 0 2.955 -1.08 1.296
17 C16 C C17 S N N 0 4.668 1.731 -0.658
18 C18 C C18 N N N 0 3.537 3.751 0.229
19 C27 C C19 N Y N 0 -3.869 0.788 -0.005
20 C29 C C20 N Y N 0 -6.205 1.195 0.366
21 C30 C C21 N Y N 0 -6.4 -0.149 0.668
22 C31 C C22 N Y N 0 -5.338 -1.024 0.638
23 N08 N N1 N N N 0 1.697 -1.756 0.903
24 N15 N N2 N N N 0 4.175 0.893 0.438
25 N23 N N3 N N N 0 -1.692 -1.05 -0.052
26 N32 N N4 N N N 0 -7.28 2.077 0.397
27 O07 O O1 N N N 0 0.874 -0.124 -0.355
28 O14 O O2 N N N 0 3.228 -0.525 -0.982
29 O19 O O3 N N N 0 2.53 3.095 0.112
30 O20 O O4 N N N 0 3.47 5.006 0.7
31 O22 O O5 N N N 0 6.456 0.196 -0.65
32 O25 O O6 N N N 0 -3.092 -2.672 0.534
33 CL33 CL CL1 N N N 0 -4.696 3.337 -0.348
34 H1 H H1 N N N 0 2.884 -3.073 3.305
35 H2 H H2 N N N 0 3.414 -4.292 2.102
36 H3 H H3 N N N 0 5.527 3.152 0.714
37 H4 H H4 N N N 0 5.32 3.764 -0.945
38 H5 H H5 N N N 0 6.497 1.675 -1.969
39 H6 H H6 N N N 0 0.454 -1.003 -2.42
40 H7 H H7 N N N 0 -0.402 -2.104 -3.526
41 H8 H H8 N N N 0 -1.324 -0.977 -2.502
42 H9 H H9 N N N 0 -1.722 -4.017 -2.61
43 H10 H H10 N N N 0 -1.808 -4.279 -0.851
44 H11 H H11 N N N 0 -2.645 -2.89 -1.587
45 H12 H H12 N N N 0 1.621 -2.97 -1.293
46 H13 H H13 N N N 0 0.642 -4.372 -0.799
47 H14 H H14 N N N 0 0.826 -3.977 -2.525
48 H15 H H15 N N N 0 -0.682 -2.729 0.697
49 H16 H H16 N N N 0 1.62 -3.85 0.682
50 H17 H H17 N N N 0 0.85 -3.219 2.163
51 H18 H H18 N N N 0 4.727 -1.913 2.278
52 H19 H H19 N N N 0 4.382 -2.617 0.663
53 H20 H H20 N N N 0 2.799 -0.479 2.191
54 H21 H H21 N N N 0 3.942 1.73 -1.471
55 H22 H H22 N N N 0 -2.885 1.148 -0.267
56 H23 H H23 N N N 0 -7.385 -0.506 0.93
57 H24 H H24 N N N 0 -5.49 -2.068 0.872
58 H25 H H25 N N N 0 4.362 1.138 1.357
59 H26 H H26 N N N 0 -1.556 -0.113 -0.262
60 H27 H H27 N N N 0 -7.146 3.014 0.184
61 H28 H H28 N N N 0 -8.164 1.755 0.633
62 H29 H H29 N N N 0 2.593 5.341 0.933