Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : P6E

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C11 C C1 N Y N 0 -1.19 -1.344 0.41
2 C12 C C2 N Y N 0 -0.749 -0.042 0.602
3 C13 C C3 N Y N 0 0.599 0.249 0.526
4 C14 C C4 N Y N 0 1.512 -0.76 0.257
5 C15 C C5 N Y N 0 1.072 -2.062 0.064
6 C20 C C6 N Y N 0 -0.275 -2.355 0.146
7 C24 C C7 N Y N 0 4.19 2.886 -0.184
8 C26 C C8 N Y N 0 4.047 3.362 1.107
9 C27 C C9 N Y N 0 3.499 2.556 2.087
10 C28 C C10 N Y N 0 3.093 1.271 1.78
11 C02 C C11 N N N 0 -3.47 -0.684 0.221
12 C03 C C12 N N N 0 -4.936 -0.961 0.433
13 C04 C C13 N Y N 0 -5.737 0.261 0.065
14 C05 C C14 N Y N 0 -6.192 0.424 -1.23
15 C06 C C15 N Y N 0 -6.927 1.546 -1.568
16 C07 C C16 N Y N 0 -7.207 2.503 -0.611
17 C08 C C17 N Y N 0 -6.752 2.339 0.684
18 C09 C C18 N Y N 0 -6.021 1.216 1.023
19 C22 C C19 N Y N 0 3.236 0.79 0.486
20 C23 C C20 N Y N 0 3.786 1.601 -0.496
21 N10 N N1 N N N 0 -2.557 -1.64 0.487
22 N18 N N2 N N N 0 2.917 -3.014 -1.742
23 O01 O O1 N N N 0 -3.111 0.4 -0.189
24 O17 O O2 N N N 0 3.27 -3.207 0.692
25 O19 O O3 N N N 0 1.478 -4.536 -0.436
26 O21 O O4 N N N 0 2.839 -0.473 0.182
27 S16 S S1 N N N 0 2.233 -3.344 -0.27
28 CL CL CL1 N N N 0 4.872 3.904 -1.414
29 H1 H H1 N N N 0 -1.46 0.744 0.811
30 H2 H H2 N N N 0 0.942 1.262 0.676
31 H3 H H3 N N N 0 -0.617 -3.368 -0.004
32 H4 H H4 N N N 0 4.363 4.366 1.35
33 H5 H H5 N N N 0 3.388 2.93 3.094
34 H6 H H6 N N N 0 2.666 0.642 2.546
35 H7 H H7 N N N 0 -5.241 -1.799 -0.194
36 H8 H H8 N N N 0 -5.111 -1.208 1.48
37 H9 H H9 N N N 0 -5.973 -0.323 -1.978
38 H12 H H12 N N N 0 -6.97 3.087 1.432
39 H10 H H10 N N N 0 -7.282 1.674 -2.58
40 H11 H H11 N N N 0 -7.78 3.379 -0.875
41 H13 H H13 N N N 0 -5.669 1.086 2.036
42 H14 H H14 N N N 0 3.898 1.229 -1.504
43 H15 H H15 N N N 0 -2.848 -2.532 0.731
44 H16 H H16 N N N 0 2.645 -2.226 -2.238
45 H17 H H17 N N N 0 3.589 -3.609 -2.109