Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : OMT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 22


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 1.865 -0.268 -1.813
2 CA C CA S N N 0 0.427 -0.568 -1.765
3 CB C CB N N N 0 -0.176 0.028 -0.493
4 CG C CG N N N 0 0.512 -0.577 0.731
5 SD S SD N N N 0 -0.203 0.13 2.24
6 CE C CE N N N 0 0.783 -0.753 3.479
7 C C C N N N 0 -0.25 0.028 -2.971
8 O O O N N N 0 0.19 1.034 -3.476
9 OD1 O OD1 N N N 0 -1.558 -0.283 2.347
10 OXT O OXT N N Y 0 -1.343 -0.556 -3.485
11 OD2 O OD2 N N N 0 0.114 1.514 2.297
12 H H 1HN N N N 0 2.258 -0.594 -0.942
13 H2 H 2HN N N Y 0 1.951 0.736 -1.812
14 HA H HA N N N 0 0.282 -1.648 -1.764
15 HB2 H 1HB N N N 0 -1.242 -0.194 -0.457
16 HB3 H 2HB N N N 0 -0.03 1.108 -0.494
17 HG2 H 1HG N N N 0 1.578 -0.355 0.696
18 HG3 H 2HG N N N 0 0.366 -1.658 0.732
19 HE1 H 1HE N N N 0 0.477 -0.44 4.477
20 HE2 H 2HE N N N 0 0.626 -1.826 3.37
21 HE3 H 3HE N N N 0 1.838 -0.523 3.334
22 HXT H HXT N N Y 0 -1.779 -0.172 -4.259