Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : OMA

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 55


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -10.171 -1.344 -0.339
2 C18 C C18 N N N 0 -9.077 -0.678 0.063
3 O O O N N N 0 -9.182 0.246 0.835
4 C17 C C17 N N N 0 -7.719 -1.082 -0.448
5 C16 C C16 N N N 0 -6.653 -0.169 0.16
6 C15 C C15 N N N 0 -5.273 -0.579 -0.359
7 C14 C C14 N N N 0 -4.207 0.334 0.25
8 C13 C C13 N N N 0 -2.827 -0.076 -0.269
9 C12 C C12 N N N 0 -1.761 0.837 0.34
10 C11 C C11 N N N 0 -0.382 0.427 -0.18
11 C10 C C10 N N N 0 0.685 1.34 0.429
12 C9 C C9 N N N 0 2.064 0.93 -0.09
13 C8 C C8 S N N 0 3.13 1.844 0.519
14 C7 C C7 N N N 0 3.927 2.734 -0.437
15 C6 C C6 R N N 0 4.595 1.521 0.214
16 C5 C C5 N N N 0 4.88 0.31 -0.676
17 C4 C C4 N N N 0 6.369 0.086 -0.757
18 C3 C C3 N N N 0 6.874 -1.08 -0.438
19 C2 C C2 N N N 0 8.362 -1.303 -0.52
20 C1 C C1 N N N 0 8.878 -1.802 0.832
21 C C C N N N 0 10.388 -2.029 0.75
22 H1 H H1 N N N 0 -11.021 -1.048 0.016
23 H2 H H2 N N N 0 -7.516 -2.115 -0.166
24 H3 H H3 N N N 0 -7.697 -0.991 -1.534
25 H4 H H4 N N N 0 -6.855 0.864 -0.122
26 H5 H H5 N N N 0 -6.674 -0.259 1.246
27 H6 H H6 N N N 0 -5.071 -1.612 -0.076
28 H7 H H7 N N N 0 -5.252 -0.488 -1.445
29 H8 H H8 N N N 0 -4.409 1.368 -0.033
30 H9 H H9 N N N 0 -4.228 0.244 1.336
31 H10 H H10 N N N 0 -2.625 -1.109 0.013
32 H11 H H11 N N N 0 -2.806 0.015 -1.355
33 H12 H H12 N N N 0 -1.963 1.871 0.057
34 H13 H H13 N N N 0 -1.782 0.747 1.426
35 H14 H H14 N N N 0 -0.179 -0.606 0.103
36 H15 H H15 N N N 0 -0.36 0.518 -1.266
37 H16 H H16 N N N 0 0.482 2.374 0.147
38 H17 H H17 N N N 0 0.663 1.25 1.515
39 H18 H H18 N N N 0 2.266 -0.103 0.193
40 H19 H H19 N N N 0 2.085 1.021 -1.176
41 H20 H H20 N N N 0 2.898 2.245 1.505
42 H21 H H21 N N N 0 3.692 2.669 -1.499
43 H22 H H22 N N N 0 4.219 3.721 -0.079
44 H23 H H23 N N N 0 5.326 1.71 1.0
45 H24 H H24 N N N 0 4.403 -0.574 -0.252
46 H25 H H25 N N N 0 4.485 0.492 -1.676
47 H26 H H26 N N N 0 7.018 0.887 -1.078
48 H27 H H27 N N N 0 6.225 -1.88 -0.117
49 H28 H H28 N N N 0 8.577 -2.047 -1.287
50 H29 H H29 N N N 0 8.857 -0.366 -0.774
51 H30 H H30 N N N 0 8.663 -1.058 1.6
52 H31 H H31 N N N 0 8.383 -2.739 1.086
53 H32 H H32 N N N 0 10.603 -2.773 -0.018
54 H33 H H33 N N N 0 10.883 -1.091 0.496
55 H34 H H34 N N N 0 10.755 -2.384 1.713