Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : OHT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 58


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C10 N N N 0 -0.987 -1.496 4.231
2 C9 C C9 N N N 0 -1.694 -0.22 3.77
3 C8 C C8 N N N 0 -1.464 -0.024 2.293
4 C11 C C11 N Y N 0 -2.608 0.022 1.371
5 C16 C C16 N Y N 0 -3.473 -1.072 1.267
6 C15 C C15 N Y N 0 -4.543 -1.02 0.399
7 C14 C C14 N Y N 0 -4.764 0.11 -0.366
8 C13 C C13 N Y N 0 -3.913 1.197 -0.269
9 C12 C C12 N Y N 0 -2.842 1.164 0.597
10 C7 C C7 N N N 0 -0.202 0.108 1.815
11 C1 C C1 N Y N 0 0.948 0.061 2.743
12 C2 C C2 N Y N 0 1.932 -0.917 2.59
13 C3 C C3 N Y N 0 3.003 -0.957 3.456
14 C4 C C4 N Y N 0 3.104 -0.026 4.481
15 O4 O O4 N N N 0 4.162 -0.069 5.334
16 C5 C C5 N Y N 0 2.128 0.948 4.638
17 C6 C C6 N Y N 0 1.057 0.999 3.771
18 C17 C C17 N Y N 0 0.023 0.301 0.366
19 C18 C C18 N Y N 0 0.664 1.451 -0.095
20 C19 C C19 N Y N 0 0.873 1.627 -1.446
21 C20 C C20 N Y N 0 0.446 0.661 -2.348
22 O20 O O20 N N N 0 0.654 0.837 -3.679
23 C23 C C23 N N N 0 0.111 -0.308 -4.337
24 C24 C C24 N N N 0 0.313 -0.172 -5.847
25 N24 N N24 N N N 0 1.75 -0.17 -6.151
26 C25 C C25 N N N 0 2.209 -1.561 -6.033
27 C26 C C26 N N N 0 1.882 0.198 -7.567
28 C21 C C21 N Y N 0 -0.191 -0.485 -1.892
29 C22 C C22 N Y N 0 -0.399 -0.669 -0.542
30 H101 H 1H10 N N N 0 0.081 -1.41 4.038
31 H102 H 2H10 N N N 0 -1.153 -1.638 5.299
32 H103 H 3H10 N N N 0 -1.387 -2.351 3.684
33 H91 H 1H9 N N N 0 -2.763 -0.307 3.963
34 H92 H 2H9 N N N 0 -1.294 0.633 4.316
35 H16 H H16 N N N 0 -3.301 -1.956 1.864
36 H15 H H15 N N N 0 -5.211 -1.865 0.317
37 H14 H H14 N N N 0 -5.604 0.144 -1.043
38 H13 H H13 N N N 0 -4.092 2.076 -0.871
39 H12 H H12 N N N 0 -2.179 2.013 0.672
40 H2 H H2 N N N 0 1.853 -1.642 1.793
41 H3 H H3 N N N 0 3.764 -1.714 3.338
42 HO4 H HO4 N N N 0 4.853 0.485 4.949
43 H5 H H5 N N N 0 2.211 1.671 5.436
44 H6 H H6 N N N 0 0.299 1.758 3.893
45 H18 H H18 N N N 0 0.997 2.203 0.605
46 H19 H H19 N N N 0 1.369 2.517 -1.804
47 H231 H 1H23 N N N 0 0.619 -1.205 -3.982
48 H232 H 2H23 N N N 0 -0.953 -0.383 -4.118
49 H241 H 1H24 N N N 0 -0.163 -1.011 -6.355
50 H242 H 2H24 N N N 0 -0.131 0.76 -6.191
51 H251 H 1H25 N N N 0 3.276 -1.612 -6.25
52 H252 H 2H25 N N N 0 2.027 -1.919 -5.019
53 H253 H 3H25 N N N 0 1.664 -2.185 -6.741
54 H261 H 1H26 N N N 0 2.93 0.14 -7.861
55 H262 H 2H26 N N N 0 1.295 -0.487 -8.177
56 H263 H 3H26 N N N 0 1.52 1.215 -7.712
57 H21 H H21 N N N 0 -0.522 -1.234 -2.596
58 H22 H H22 N N N 0 -0.896 -1.561 -0.189