Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : O47

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -1.84 1.752 -0.007
2 C2 C C2 N Y N 0 -2.811 0.784 0.156
3 C3 C C3 N Y N 0 -2.449 -0.562 0.246
4 C4 C C4 N Y N 0 -1.105 -0.925 0.172
5 C5 C C5 N Y N 0 -0.133 0.056 0.008
6 C6 C C6 N Y N 0 -0.508 1.397 -0.081
7 C7 C C7 N N N 0 -2.237 3.202 -0.109
8 F8 F F8 N N N 0 -1.812 3.716 -1.339
9 F9 F F9 N N N 0 -3.628 3.313 -0.014
10 F10 F F10 N N N 0 -1.64 3.924 0.929
11 N11 N N11 N Y N 0 1.665 -1.598 0.012
12 C12 C C12 N Y N 0 1.298 -0.323 -0.072
13 C13 C C13 N Y N 0 2.284 0.656 -0.237
14 C14 C C14 N Y N 0 3.608 0.255 -0.307
15 N15 N N15 N Y N 0 3.899 -1.032 -0.216
16 C16 C C16 N Y N 0 2.944 -1.939 -0.06
17 C17 C C17 N N N 0 4.704 1.273 -0.485
18 C18 C C18 N N N 0 5.733 1.116 0.637
19 C19 C C19 N N N 0 6.846 2.15 0.457
20 C20 C C20 N N N 0 -3.489 -1.599 0.421
21 N21 N N21 N N N 0 -3.382 -2.776 -0.228
22 O22 O O22 N N N 0 -4.439 -1.39 1.149
23 C23 C C23 N N N 0 -4.463 -3.761 -0.139
24 C24 C C24 N N N 0 -2.186 -3.07 -1.02
25 C25 C C25 N N N 0 3.315 -3.368 0.037
26 N26 N N26 N N N 0 2.399 -4.265 0.189
27 H2 H H2 N N N 0 -3.851 1.067 0.214
28 H4 H H4 N N N 0 -0.82 -1.965 0.241
29 H6 H H6 N N N 0 0.247 2.159 -0.208
30 H13 H H13 N N N 0 2.018 1.701 -0.309
31 H17 H H17 N N N 0 5.191 1.119 -1.448
32 H17A H H17A N N N 0 4.278 2.276 -0.45
33 H18 H H18 N N N 0 5.246 1.271 1.6
34 H18A H H18A N N N 0 6.159 0.114 0.602
35 H19 H H19 N N N 0 7.579 2.039 1.256
36 H19A H H19A N N N 0 7.332 1.996 -0.507
37 H19B H H19B N N N 0 6.42 3.153 0.492
38 H23 H H23 N N N 0 -5.177 -3.59 -0.945
39 H23A H H23A N N N 0 -4.048 -4.765 -0.229
40 H23B H H23B N N N 0 -4.968 -3.661 0.822
41 H24 H H24 N N N 0 -1.415 -3.488 -0.373
42 H24A H H24A N N N 0 -2.435 -3.789 -1.801
43 H24B H H24B N N N 0 -1.818 -2.151 -1.477
44 H25 H H25 N N N 0 4.353 -3.661 -0.02
45 HN26 H HN26 N N N 0 2.643 -5.201 0.253