Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NW5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 59


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -1.7 0.756 0.295
2 C2 C C2 N Y N 0 -1.563 2.115 0.024
3 C3 C C3 N Y N 0 -0.354 2.742 0.246
4 C11 C C4 N Y N 0 5.866 -2.863 1.371
5 C12 C C5 N Y N 0 5.518 -2.66 0.048
6 C13 C C6 N Y N 0 4.399 -1.915 -0.267
7 C14 C C7 N N N 0 4.02 -1.695 -1.709
8 C15 C C8 N N N 0 4.585 -0.381 -2.182
9 C18 C C9 N Y N 0 -2.998 0.076 0.058
10 C19 C C10 N Y N 0 -3.139 -1.283 0.334
11 C20 C C11 N Y N 0 -4.346 -1.905 0.114
12 C21 C C12 N Y N 0 -5.435 -1.196 -0.378
13 C22 C C13 N Y N 0 -5.289 0.162 -0.658
14 C23 C C14 N Y N 0 -4.086 0.793 -0.437
15 C24 C C15 S N N 0 -4.799 -3.341 0.302
16 C25 C C16 N N N 0 -6.108 -3.373 -0.522
17 C28 C C17 N Y N 0 -0.613 0.035 0.785
18 C29 C C18 N N N 0 -0.204 4.213 -0.047
19 C30 C C19 N N N 0 -1.158 4.977 0.775
20 C4 C C20 N Y N 0 0.721 2.024 0.737
21 C5 C C21 N Y N 0 0.592 0.672 1.003
22 C6 C C22 N N N 0 1.769 -0.106 1.533
23 O7 O O1 N N N 0 2.52 -0.637 0.439
24 C8 C C23 N Y N 0 3.623 -1.37 0.746
25 C9 C C24 N Y N 0 3.974 -1.574 2.072
26 C10 C C25 N Y N 0 5.092 -2.325 2.382
27 O16 O O2 N N N 0 4.372 0.026 -3.443
28 O17 O O3 N N N 0 5.229 0.307 -1.426
29 O26 O O4 N N N 0 -6.528 -1.998 -0.506
30 N27 N N1 N N N 0 -3.81 -4.279 -0.246
31 N31 N N2 N N N 0 -1.893 5.566 1.409
32 C32 C C26 N N N 0 1.223 4.656 0.283
33 C33 C C27 N N N 0 -0.488 4.47 -1.528
34 H1 H H1 N N N 0 -2.402 2.678 -0.359
35 H2 H H2 N N N 0 6.742 -3.445 1.615
36 H3 H H3 N N N 0 6.123 -3.084 -0.74
37 H4 H H4 N N N 0 4.423 -2.504 -2.318
38 H5 H H5 N N N 0 2.934 -1.678 -1.8
39 H6 H H6 N N N 0 -2.303 -1.847 0.72
40 H7 H H7 N N N 0 -6.126 0.723 -1.046
41 H8 H H8 N N N 0 -3.983 1.847 -0.651
42 H9 H H9 N N N 0 -4.994 -3.553 1.353
43 H10 H H10 N N N 0 -5.914 -3.706 -1.541
44 H11 H H11 N N N 0 -6.851 -4.009 -0.041
45 H12 H H12 N N N 0 -0.712 -1.02 0.993
46 H13 H H13 N N N 0 1.665 2.518 0.91
47 H14 H H14 N N N 0 2.404 0.554 2.124
48 H15 H H15 N N N 0 1.412 -0.923 2.159
49 H16 H H16 N N N 0 3.372 -1.151 2.862
50 H17 H H17 N N N 0 5.365 -2.485 3.414
51 H18 H H18 N N N 0 4.755 0.876 -3.701
52 H19 H H19 N N N 0 -4.11 -5.234 -0.122
53 H20 H H20 N N N 0 -3.625 -4.082 -1.218
54 H22 H H22 N N N 0 1.929 4.091 -0.325
55 H23 H H23 N N N 0 1.331 5.72 0.071
56 H24 H H24 N N N 0 1.425 4.473 1.339
57 H25 H H25 N N N 0 -1.504 4.154 -1.763
58 H26 H H26 N N N 0 -0.38 5.533 -1.74
59 H27 H H27 N N N 0 0.218 3.904 -2.137