Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NTK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N N N 0 0.29 0.52 0.125
2 C03 C C2 N N N 0 1.602 1.212 -0.249
3 C04 C C3 N N N 0 -0.888 1.421 -0.253
4 C07 C C4 N N N 0 3.953 0.883 -0.034
5 C08 C C5 N N N 0 5.163 0.107 0.418
6 C09 C C6 N N N 0 6.432 0.859 0.011
7 C10 C C7 N N N 0 7.66 0.071 0.47
8 C11 C C8 N N N 0 -3.261 1.487 -0.046
9 C12 C C9 N N N 0 -4.585 0.923 0.402
10 C13 C C10 N N N 0 -5.71 1.874 -0.01
11 C14 C C11 N N N 0 -7.054 1.301 0.445
12 C15 C C12 N N N 0 -0.498 -1.726 0.007
13 C16 C C13 N N N 0 -0.648 -3.061 -0.676
14 C17 C C14 N N N 0 -1.464 -4.001 0.214
15 C18 C C15 N N N 0 -1.617 -5.356 -0.48
16 O02 O O1 N N N 0 0.186 -0.739 -0.592
17 O05 O O2 N N N 0 2.721 0.412 0.216
18 O06 O O3 N N N 0 -2.126 0.817 0.208
19 O19 O O4 N N N 0 -0.993 -1.545 1.094
20 O20 O O5 N N N 0 4.091 1.93 -0.622
21 O21 O O6 N N N 0 -3.222 2.542 -0.634
22 H1 H H1 N N N 0 0.272 0.329 1.198
23 H2 H H2 N N N 0 1.659 1.323 -1.332
24 H3 H H3 N N N 0 1.64 2.196 0.219
25 H4 H H4 N N N 0 -0.763 2.397 0.215
26 H5 H H5 N N N 0 -0.922 1.538 -1.336
27 H6 H H6 N N N 0 5.138 -0.004 1.502
28 H7 H H7 N N N 0 5.158 -0.877 -0.049
29 H8 H H8 N N N 0 6.456 0.97 -1.073
30 H9 H H9 N N N 0 6.437 1.844 0.478
31 H10 H H10 N N N 0 7.655 -0.914 0.003
32 H11 H H11 N N N 0 8.564 0.606 0.18
33 H12 H H12 N N N 0 7.636 -0.041 1.554
34 H13 H H13 N N N 0 -4.742 -0.05 -0.065
35 H14 H H14 N N N 0 -4.583 0.809 1.486
36 H15 H H15 N N N 0 -5.553 2.846 0.458
37 H16 H H16 N N N 0 -5.712 1.988 -1.094
38 H17 H H17 N N N 0 -7.211 0.329 -0.022
39 H18 H H18 N N N 0 -7.052 1.188 1.529
40 H19 H H19 N N N 0 -7.856 1.979 0.152
41 H20 H H20 N N N 0 -1.161 -2.926 -1.628
42 H21 H H21 N N N 0 0.338 -3.492 -0.852
43 H22 H H22 N N N 0 -0.952 -4.136 1.166
44 H23 H H23 N N N 0 -2.45 -3.57 0.39
45 H24 H H24 N N N 0 -0.631 -5.787 -0.655
46 H25 H H25 N N N 0 -2.198 -6.025 0.154
47 H26 H H26 N N N 0 -2.129 -5.221 -1.432