Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NCT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 -0.673 1.148 -2.425
2 C1 C C1 N Y N 0 -0.633 0.882 -1.134
3 C2 C C2 N Y N 0 -0.018 -0.263 -0.667
4 C3 C C3 N Y N 0 0.551 -1.142 -1.576
5 C4 C C4 N Y N 0 0.484 -0.832 -2.925
6 C5 C C5 N Y N 0 -0.142 0.335 -3.317
7 N2 N N2 N N N 0 0.615 0.586 1.556
8 C6 C C6 S N N 0 0.028 -0.556 0.81
9 C7 C C7 N N N 0 -1.403 -0.662 1.392
10 C8 C C8 N N N 0 -1.193 -0.336 2.888
11 C9 C C9 N N N 0 0.128 0.451 2.946
12 C10 C C10 N N N 0 2.066 0.365 1.594
13 HC1 H HC1 N N N 0 -1.079 1.572 -0.433
14 HC3 H HC3 N N N 0 1.035 -2.047 -1.24
15 HC4 H HC4 N N N 0 0.917 -1.493 -3.661
16 HC5 H HC5 N N N 0 -0.198 0.585 -4.366
17 HC81 H 1HC8 N N N 0 -1.111 -1.255 3.468
18 HC6 H HC6 N N N 0 0.59 -1.47 1.002
19 HC71 H 1HC7 N N N 0 -1.795 -1.671 1.268
20 HC72 H 2HC7 N N N 0 -2.063 0.068 0.926
21 HC82 H 2HC8 N N N 0 -2.015 0.275 3.261
22 HC91 H 1HC9 N N N 0 0.859 -0.092 3.544
23 HC92 H 2HC9 N N N 0 -0.045 1.438 3.375
24 H101 H 1H10 N N N 0 2.27 -0.66 1.902
25 H102 H 2H10 N N N 0 2.486 0.536 0.602
26 H103 H 3H10 N N N 0 2.521 1.055 2.305