Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : N75

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -5.196 -2.731 -0.013
2 C2 C C2 N Y N 0 -6.323 -1.933 -0.018
3 C3 C C3 N Y N 0 -6.201 -0.531 -0.018
4 C4 C C4 N Y N 0 -4.935 0.054 -0.013
5 C5 C C5 N Y N 0 -3.807 -0.754 -0.007
6 C6 C C6 N Y N 0 -3.931 -2.155 -0.007
7 C7 C C7 N Y N 0 -2.356 -0.482 -0.001
8 C8 C C8 N Y N 0 -1.747 -1.723 0.003
9 O1 O O1 N Y N 0 -2.69 -2.684 -0.002
10 C9 C C9 N Y N 0 -0.292 -1.958 0.009
11 C10 C C10 N Y N 0 0.208 -3.264 0.012
12 C11 C C11 N Y N 0 1.569 -3.478 0.017
13 C12 C C12 N Y N 0 2.444 -2.4 0.021
14 C13 C C13 N Y N 0 1.952 -1.1 0.018
15 C14 C C14 N Y N 0 0.593 -0.876 0.006
16 O2 O O2 N N N 0 3.785 -2.616 0.027
17 C15 C C15 N N N 0 4.628 -1.463 0.03
18 C16 C C16 N N N 0 6.072 -1.896 0.037
19 N1 N N1 N N N 0 7.053 -0.971 0.041
20 O3 O O3 N N N 0 6.351 -3.076 0.04
21 C17 C C17 N N N 0 8.456 -1.392 0.048
22 C18 C C18 N N N 0 9.419 -0.655 -0.884
23 C19 C C19 N N N 0 9.483 -0.417 0.626
24 C20 C C20 N N N 0 -1.715 0.799 0.001
25 C21 C C21 N N N 0 -1.189 1.848 0.003
26 C22 C C22 N Y N 0 -0.547 3.129 0.005
27 C23 C C23 N Y N 0 -1.314 4.298 0.007
28 C24 C C24 N Y N 0 -0.69 5.528 0.009
29 C25 C C25 N Y N 0 0.692 5.607 0.01
30 C26 C C26 N Y N 0 1.459 4.453 0.009
31 CL CL CL N N N 0 3.191 4.564 0.01
32 C27 C C27 N Y N 0 0.848 3.215 0.012
33 C28 C C28 N N N 0 -7.406 0.315 -0.025
34 O4 O O4 N N N 0 -8.509 -0.197 -0.03
35 O5 O O5 N N N 0 -7.287 1.658 -0.025
36 O6 O O6 N N N 0 -7.554 -2.503 -0.024
37 H1 H H1 N N N 0 -5.299 -3.806 -0.009
38 H2 H H2 N N N 0 -4.834 1.129 -0.013
39 H3 H H3 N N N 0 -0.472 -4.103 0.01
40 H4 H H4 N N N 0 1.956 -4.487 0.019
41 H5 H H5 N N N 0 2.637 -0.265 0.016
42 H6 H H6 N N N 0 0.212 0.135 0.003
43 H7 H H7 N N N 0 4.432 -0.867 -0.861
44 H11 H H11 N N N 0 10.224 -1.234 -1.337
45 H8 H H8 N N N 0 4.424 -0.865 0.919
46 H9 H H9 N N N 0 6.83 -0.027 0.04
47 H10 H H10 N N N 0 8.627 -2.457 0.209
48 H12 H H12 N N N 0 9.009 0.143 -1.502
49 H13 H H13 N N N 0 9.115 0.538 1.001
50 H14 H H14 N N N 0 10.33 -0.84 1.167
51 H15 H H15 N N N 0 -2.392 4.239 0.005
52 H16 H H16 N N N 0 -1.281 6.432 0.01
53 H17 H H17 N N N 0 1.175 6.573 0.012
54 H18 H H18 N N N 0 1.446 2.316 0.015
55 H20 H H20 N N N 0 -7.916 -2.668 0.857
56 H19 H H19 N N N 0 -8.106 2.171 -0.029